Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MSI1O43347 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
MSI1O43347 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
MSI1O43347 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.4■□□□□ 0.7
MSI1O43347 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
MSI1O43347 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MSI1O43347 Z98044.1-201ENST00000632503 1764 ntBASIC19.39■□□□□ 0.7
MSI1O43347 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MSI1O43347 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
MSI1O43347 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.39■□□□□ 0.69
MSI1O43347 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MSI1O43347 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.39■□□□□ 0.69
MSI1O43347 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.39■□□□□ 0.69
MSI1O43347 KRT18P23-201ENST00000435622 1283 ntBASIC19.39■□□□□ 0.69
MSI1O43347 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.39■□□□□ 0.69
MSI1O43347 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
MSI1O43347 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.39■□□□□ 0.69
MSI1O43347 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
MSI1O43347 AC112497.1-201ENST00000624824 639 ntBASIC19.39■□□□□ 0.69
MSI1O43347 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
MSI1O43347 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
MSI1O43347 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MSI1O43347 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MSI1O43347 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.39■□□□□ 0.69
MSI1O43347 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MSI1O43347 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MSI1O43347 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.38■□□□□ 0.69
MSI1O43347 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.38■□□□□ 0.69
MSI1O43347 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.38■□□□□ 0.69
MSI1O43347 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.38■□□□□ 0.69
MSI1O43347 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.38■□□□□ 0.69
MSI1O43347 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
MSI1O43347 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MSI1O43347 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.38■□□□□ 0.69
MSI1O43347 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.38■□□□□ 0.69
MSI1O43347 SPDYE15P-201ENST00000424157 909 ntBASIC19.38■□□□□ 0.69
MSI1O43347 SEC1P-202ENST00000473944 940 ntBASIC19.38■□□□□ 0.69
MSI1O43347 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MSI1O43347 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.38■□□□□ 0.69
MSI1O43347 AC098818.2-201ENST00000564925 2320 ntBASIC19.38■□□□□ 0.69
MSI1O43347 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MSI1O43347 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MSI1O43347 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.38■□□□□ 0.69
MSI1O43347 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.38■□□□□ 0.69
MSI1O43347 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.38■□□□□ 0.69
MSI1O43347 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
MSI1O43347 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
MSI1O43347 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.38■□□□□ 0.69
MSI1O43347 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
MSI1O43347 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.37■□□□□ 0.69
MSI1O43347 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MSI1O43347 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.37■□□□□ 0.69
MSI1O43347 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MSI1O43347 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MSI1O43347 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.37■□□□□ 0.69
MSI1O43347 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MSI1O43347 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
MSI1O43347 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.37■□□□□ 0.69
MSI1O43347 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MSI1O43347 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MSI1O43347 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
MSI1O43347 FAM8A6P-201ENST00000407496 1135 ntBASIC19.37■□□□□ 0.69
MSI1O43347 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MSI1O43347 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MSI1O43347 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.37■□□□□ 0.69
MSI1O43347 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
MSI1O43347 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.37■□□□□ 0.69
MSI1O43347 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.37■□□□□ 0.69
MSI1O43347 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.37■□□□□ 0.69
MSI1O43347 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MSI1O43347 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MSI1O43347 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
MSI1O43347 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MSI1O43347 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MSI1O43347 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MSI1O43347 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MSI1O43347 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.37■□□□□ 0.69
MSI1O43347 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
MSI1O43347 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MSI1O43347 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MSI1O43347 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MSI1O43347 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
MSI1O43347 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
MSI1O43347 AC034236.2-201ENST00000606662 1610 ntBASIC19.36■□□□□ 0.69
MSI1O43347 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MSI1O43347 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.36■□□□□ 0.69
MSI1O43347 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MSI1O43347 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.36■□□□□ 0.69
MSI1O43347 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MSI1O43347 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MSI1O43347 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.36■□□□□ 0.69
MSI1O43347 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MSI1O43347 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MSI1O43347 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MSI1O43347 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.36■□□□□ 0.69
MSI1O43347 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.36■□□□□ 0.69
MSI1O43347 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.36■□□□□ 0.69
MSI1O43347 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.36■□□□□ 0.69
MSI1O43347 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.36■□□□□ 0.69
MSI1O43347 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms