Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN4O14493 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN4O14493 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.61■□□□□ 0.41
CLDN4O14493 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN4O14493 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN4O14493 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN4O14493 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN4O14493 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN4O14493 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN4O14493 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN4O14493 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CLDN4O14493 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CLDN4O14493 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN4O14493 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN4O14493 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN4O14493 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN4O14493 TERF1P1-201ENST00000311003 1181 ntBASIC17.6■□□□□ 0.41
CLDN4O14493 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN4O14493 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN4O14493 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CLDN4O14493 AC005521.1-201ENST00000393351 872 ntBASIC17.6■□□□□ 0.41
CLDN4O14493 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN4O14493 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDN4O14493 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN4O14493 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.6■□□□□ 0.41
CLDN4O14493 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CLDN4O14493 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
CLDN4O14493 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN4O14493 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CLDN4O14493 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.6■□□□□ 0.41
CLDN4O14493 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN4O14493 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN4O14493 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDN4O14493 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.6■□□□□ 0.41
CLDN4O14493 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDN4O14493 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN4O14493 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN4O14493 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN4O14493 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN4O14493 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN4O14493 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN4O14493 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CLDN4O14493 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN4O14493 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN4O14493 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN4O14493 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN4O14493 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.59■□□□□ 0.41
CLDN4O14493 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CLDN4O14493 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN4O14493 AC036111.1-201ENST00000533973 1582 ntBASIC17.59■□□□□ 0.41
CLDN4O14493 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CLDN4O14493 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN4O14493 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN4O14493 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN4O14493 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN4O14493 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN4O14493 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.59■□□□□ 0.41
CLDN4O14493 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN4O14493 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN4O14493 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CLDN4O14493 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN4O14493 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN4O14493 MIR564-202ENST00000385049 94 ntBASIC17.59■□□□□ 0.41
CLDN4O14493 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN4O14493 AC010203.1-204ENST00000548782 407 ntBASIC17.59■□□□□ 0.41
CLDN4O14493 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN4O14493 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN4O14493 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.59■□□□□ 0.41
CLDN4O14493 AC141257.4-201ENST00000634557 245 ntBASIC17.59■□□□□ 0.41
CLDN4O14493 AC136944.6-201ENST00000634818 245 ntBASIC17.59■□□□□ 0.41
CLDN4O14493 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CLDN4O14493 AL031432.5-201ENST00000641059 760 ntBASIC17.59■□□□□ 0.41
CLDN4O14493 AC092865.7-201ENST00000641832 219 ntBASIC17.59■□□□□ 0.41
CLDN4O14493 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN4O14493 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN4O14493 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN4O14493 AP000974.1-201ENST00000623909 2387 ntBASIC17.59■□□□□ 0.41
CLDN4O14493 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN4O14493 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN4O14493 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN4O14493 HTR7P1-202ENST00000624664 4411 ntBASIC17.58■□□□□ 0.41
CLDN4O14493 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLDN4O14493 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLDN4O14493 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CLDN4O14493 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.58■□□□□ 0.41
CLDN4O14493 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CLDN4O14493 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLDN4O14493 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLDN4O14493 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLDN4O14493 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLDN4O14493 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CLDN4O14493 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN4O14493 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.58■□□□□ 0.4
CLDN4O14493 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.58■□□□□ 0.4
CLDN4O14493 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
CLDN4O14493 BX664615.1-201ENST00000443558 458 ntBASIC17.58■□□□□ 0.4
CLDN4O14493 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CLDN4O14493 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.58■□□□□ 0.4
CLDN4O14493 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN4O14493 NEK4P2-201ENST00000580004 1012 ntBASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms