Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 AL357033.4-201ENST00000617703 1807 ntBASIC13.2□□□□□ -0.3
LINC01546A6NGU7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 MYLKP1-201ENST00000509077 1580 ntBASIC13.2□□□□□ -0.3
LINC01546A6NGU7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 AC005829.2-201ENST00000571422 1056 ntBASIC13.19□□□□□ -0.3
LINC01546A6NGU7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 AC069236.1-201ENST00000604339 616 ntBASIC13.19□□□□□ -0.3
LINC01546A6NGU7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 AL138688.1-201ENST00000624851 1594 ntBASIC13.19□□□□□ -0.3
LINC01546A6NGU7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 AC046158.3-201ENST00000624947 2558 ntBASIC13.19□□□□□ -0.3
LINC01546A6NGU7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01546A6NGU7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 KRT18P55-202ENST00000578578 1546 ntBASIC13.18□□□□□ -0.3
LINC01546A6NGU7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 HTR7P1-202ENST00000624664 4411 ntBASIC13.18□□□□□ -0.3
LINC01546A6NGU7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 KRT18P41-201ENST00000518924 1277 ntBASIC13.18□□□□□ -0.3
LINC01546A6NGU7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 AC010980.2-201ENST00000587099 1412 ntBASIC13.18□□□□□ -0.3
LINC01546A6NGU7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 AC018695.7-201ENST00000624587 2492 ntBASIC13.18□□□□□ -0.3
LINC01546A6NGU7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 KRT17P1-201ENST00000399211 1546 ntBASIC13.18□□□□□ -0.3
LINC01546A6NGU7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms