Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CNOT1A5YKK6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.82■□□□□ 0.44
CNOT1A5YKK6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT1A5YKK6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
CNOT1A5YKK6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT1A5YKK6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.82■□□□□ 0.44
CNOT1A5YKK6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.82■□□□□ 0.44
CNOT1A5YKK6 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.82■□□□□ 0.44
CNOT1A5YKK6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT1A5YKK6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.82■□□□□ 0.44
CNOT1A5YKK6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.82■□□□□ 0.44
CNOT1A5YKK6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.82■□□□□ 0.44
CNOT1A5YKK6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.82■□□□□ 0.44
CNOT1A5YKK6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT1A5YKK6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.82■□□□□ 0.44
CNOT1A5YKK6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CNOT1A5YKK6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT1A5YKK6 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT1A5YKK6 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT1A5YKK6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
CNOT1A5YKK6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
CNOT1A5YKK6 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.81■□□□□ 0.44
CNOT1A5YKK6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.81■□□□□ 0.44
CNOT1A5YKK6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.81■□□□□ 0.44
CNOT1A5YKK6 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.81■□□□□ 0.44
CNOT1A5YKK6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT1A5YKK6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT1A5YKK6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT1A5YKK6 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT1A5YKK6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT1A5YKK6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT1A5YKK6 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.81■□□□□ 0.44
CNOT1A5YKK6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT1A5YKK6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.81■□□□□ 0.44
CNOT1A5YKK6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.81■□□□□ 0.44
CNOT1A5YKK6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT1A5YKK6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT1A5YKK6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT1A5YKK6 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT1A5YKK6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.8■□□□□ 0.44
CNOT1A5YKK6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CNOT1A5YKK6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT1A5YKK6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT1A5YKK6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
CNOT1A5YKK6 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.8■□□□□ 0.44
CNOT1A5YKK6 SPCS2P1-201ENST00000561636 679 ntBASIC17.8■□□□□ 0.44
CNOT1A5YKK6 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
CNOT1A5YKK6 MTDHP5-201ENST00000598980 586 ntBASIC17.8■□□□□ 0.44
CNOT1A5YKK6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.8■□□□□ 0.44
CNOT1A5YKK6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT1A5YKK6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.8■□□□□ 0.44
CNOT1A5YKK6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.8■□□□□ 0.44
CNOT1A5YKK6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.8■□□□□ 0.44
CNOT1A5YKK6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT1A5YKK6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT1A5YKK6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.8■□□□□ 0.44
CNOT1A5YKK6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.8■□□□□ 0.44
CNOT1A5YKK6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.8■□□□□ 0.44
CNOT1A5YKK6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT1A5YKK6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.8■□□□□ 0.44
CNOT1A5YKK6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.8■□□□□ 0.44
CNOT1A5YKK6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.8■□□□□ 0.44
CNOT1A5YKK6 AC104390.1-201ENST00000555663 520 ntBASIC17.8■□□□□ 0.44
CNOT1A5YKK6 AC021087.4-201ENST00000563761 564 ntBASIC17.8■□□□□ 0.44
CNOT1A5YKK6 AC040169.1-201ENST00000565382 521 ntBASIC17.8■□□□□ 0.44
CNOT1A5YKK6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.8■□□□□ 0.44
CNOT1A5YKK6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.8■□□□□ 0.44
CNOT1A5YKK6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.8■□□□□ 0.44
CNOT1A5YKK6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT1A5YKK6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT1A5YKK6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.79■□□□□ 0.44
CNOT1A5YKK6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT1A5YKK6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.79■□□□□ 0.44
CNOT1A5YKK6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT1A5YKK6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
CNOT1A5YKK6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CNOT1A5YKK6 KRT18P28-201ENST00000453838 1332 ntBASIC17.79■□□□□ 0.44
CNOT1A5YKK6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.79■□□□□ 0.44
CNOT1A5YKK6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.79■□□□□ 0.44
CNOT1A5YKK6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.79■□□□□ 0.44
CNOT1A5YKK6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT1A5YKK6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.79■□□□□ 0.44
CNOT1A5YKK6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CNOT1A5YKK6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT1A5YKK6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT1A5YKK6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT1A5YKK6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT1A5YKK6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
CNOT1A5YKK6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CNOT1A5YKK6 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.79■□□□□ 0.44
CNOT1A5YKK6 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT1A5YKK6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT1A5YKK6 FGFR3P6-201ENST00000457012 610 ntBASIC17.79■□□□□ 0.44
CNOT1A5YKK6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.79■□□□□ 0.44
CNOT1A5YKK6 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CNOT1A5YKK6 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT1A5YKK6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CNOT1A5YKK6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT1A5YKK6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT1A5YKK6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms