Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 FXN-202ENST00000396364 980 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 AP001271.2-201ENST00000624018 1556 ntBASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM238LA0A1B0GVL6 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 ALDH8A1-203ENST00000367845 2383 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 pRNA.6-201ENST00000610482 90 ntBASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 pRNA.5-201ENST00000612139 90 ntBASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 pRNA.11-201ENST00000618423 90 ntBASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 pRNA.13-201ENST00000619112 90 ntBASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 AC023024.2-201ENST00000623561 1993 ntBASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM238LA0A1B0GVL6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC13.08□□□□□ -0.31
TMEM238LA0A1B0GVL6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
TMEM238LA0A1B0GVL6 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.08□□□□□ -0.31
TMEM238LA0A1B0GVL6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
TMEM238LA0A1B0GVL6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
TMEM238LA0A1B0GVL6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC13.08□□□□□ -0.31
TMEM238LA0A1B0GVL6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
TMEM238LA0A1B0GVL6 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
TMEM238LA0A1B0GVL6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM238LA0A1B0GVL6 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM238LA0A1B0GVL6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM238LA0A1B0GVL6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC13.08□□□□□ -0.32
TMEM238LA0A1B0GVL6 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM238LA0A1B0GVL6 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM238LA0A1B0GVL6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms