Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF103-CHMP3A0A140T963 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF103-CHMP3A0A140T963 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF103-CHMP3A0A140T963 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.02■□□□□ 0.48
RNF103-CHMP3A0A140T963 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF103-CHMP3A0A140T963 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF103-CHMP3A0A140T963 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF103-CHMP3A0A140T963 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF103-CHMP3A0A140T963 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF103-CHMP3A0A140T963 ID1-201ENST00000376105 1233 ntBASIC18.02■□□□□ 0.48
RNF103-CHMP3A0A140T963 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
RNF103-CHMP3A0A140T963 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF103-CHMP3A0A140T963 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF103-CHMP3A0A140T963 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF103-CHMP3A0A140T963 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.48
RNF103-CHMP3A0A140T963 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.02■□□□□ 0.48
RNF103-CHMP3A0A140T963 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF103-CHMP3A0A140T963 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.02■□□□□ 0.48
RNF103-CHMP3A0A140T963 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
RNF103-CHMP3A0A140T963 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.02■□□□□ 0.48
RNF103-CHMP3A0A140T963 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF103-CHMP3A0A140T963 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF103-CHMP3A0A140T963 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.02■□□□□ 0.48
RNF103-CHMP3A0A140T963 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF103-CHMP3A0A140T963 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF103-CHMP3A0A140T963 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF103-CHMP3A0A140T963 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF103-CHMP3A0A140T963 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF103-CHMP3A0A140T963 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RNF103-CHMP3A0A140T963 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.02■□□□□ 0.47
RNF103-CHMP3A0A140T963 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 AC069544.1-201ENST00000609399 999 ntBASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF103-CHMP3A0A140T963 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 C1QL1P1-201ENST00000568105 661 ntBASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 AC004264.1-201ENST00000608354 794 ntBASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF103-CHMP3A0A140T963 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms