Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV7-1A0A0A6YYK4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV7-1A0A0A6YYK4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV7-1A0A0A6YYK4 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.52□□□□□ -0.09
TRBV7-1A0A0A6YYK4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV7-1A0A0A6YYK4 AL023284.2-201ENST00000405850 579 ntBASIC14.52□□□□□ -0.09
TRBV7-1A0A0A6YYK4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.52□□□□□ -0.09
TRBV7-1A0A0A6YYK4 BX088651.1-201ENST00000540551 451 ntBASIC14.52□□□□□ -0.09
TRBV7-1A0A0A6YYK4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.52□□□□□ -0.09
TRBV7-1A0A0A6YYK4 AL353719.1-201ENST00000566847 864 ntBASIC14.52□□□□□ -0.09
TRBV7-1A0A0A6YYK4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV7-1A0A0A6YYK4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.52□□□□□ -0.09
TRBV7-1A0A0A6YYK4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV7-1A0A0A6YYK4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
TRBV7-1A0A0A6YYK4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV7-1A0A0A6YYK4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV7-1A0A0A6YYK4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
TRBV7-1A0A0A6YYK4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV7-1A0A0A6YYK4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TRBV7-1A0A0A6YYK4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV7-1A0A0A6YYK4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV7-1A0A0A6YYK4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV7-1A0A0A6YYK4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV7-1A0A0A6YYK4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV7-1A0A0A6YYK4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.52□□□□□ -0.09
TRBV7-1A0A0A6YYK4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV7-1A0A0A6YYK4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV7-1A0A0A6YYK4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.52□□□□□ -0.09
TRBV7-1A0A0A6YYK4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 AC128688.1-201ENST00000487626 519 ntBASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 AC093827.2-201ENST00000512654 315 ntBASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 AC008622.2-201ENST00000617006 1229 ntBASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 WIZP1-201ENST00000531444 2299 ntBASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV7-1A0A0A6YYK4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 GPAT2P1-201ENST00000444924 1672 ntBASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 AC008556.1-201ENST00000610908 2040 ntBASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 AP000593.1-201ENST00000393668 712 ntBASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 MIR3180-5-201ENST00000583743 153 ntBASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 AL023803.3-201ENST00000615559 522 ntBASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV7-1A0A0A6YYK4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms