Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN16Q9Y5I7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CLDN16Q9Y5I7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CLDN16Q9Y5I7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN16Q9Y5I7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.39■□□□□ 0.37
CLDN16Q9Y5I7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.39■□□□□ 0.37
CLDN16Q9Y5I7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN16Q9Y5I7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN16Q9Y5I7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CLDN16Q9Y5I7 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.39■□□□□ 0.37
CLDN16Q9Y5I7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.39■□□□□ 0.37
CLDN16Q9Y5I7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN16Q9Y5I7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN16Q9Y5I7 SPDYE15P-201ENST00000424157 909 ntBASIC17.39■□□□□ 0.37
CLDN16Q9Y5I7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN16Q9Y5I7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.39■□□□□ 0.37
CLDN16Q9Y5I7 AC022616.7-201ENST00000525383 220 ntBASIC17.39■□□□□ 0.37
CLDN16Q9Y5I7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN16Q9Y5I7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN16Q9Y5I7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN16Q9Y5I7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.39■□□□□ 0.37
CLDN16Q9Y5I7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN16Q9Y5I7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN16Q9Y5I7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN16Q9Y5I7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN16Q9Y5I7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
CLDN16Q9Y5I7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN16Q9Y5I7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN16Q9Y5I7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN16Q9Y5I7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN16Q9Y5I7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CLDN16Q9Y5I7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN16Q9Y5I7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CLDN16Q9Y5I7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.38■□□□□ 0.37
CLDN16Q9Y5I7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.38■□□□□ 0.37
CLDN16Q9Y5I7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN16Q9Y5I7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN16Q9Y5I7 AC140113.3-201ENST00000605663 199 ntBASIC17.38■□□□□ 0.37
CLDN16Q9Y5I7 MYC-208ENST00000641036 567 ntBASIC17.38■□□□□ 0.37
CLDN16Q9Y5I7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN16Q9Y5I7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDN16Q9Y5I7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN16Q9Y5I7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN16Q9Y5I7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN16Q9Y5I7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN16Q9Y5I7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN16Q9Y5I7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN16Q9Y5I7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN16Q9Y5I7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDN16Q9Y5I7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN16Q9Y5I7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN16Q9Y5I7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CLDN16Q9Y5I7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 STARP1-201ENST00000397973 869 ntBASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 AL049597.2-201ENST00000565575 961 ntBASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 HYMAI.1-201ENST00000620949 238 ntBASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms