Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.8■□□□□ 0.44
LRCH1Q9Y2L9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LRCH1Q9Y2L9 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.8■□□□□ 0.44
LRCH1Q9Y2L9 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.8■□□□□ 0.44
LRCH1Q9Y2L9 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRCH1Q9Y2L9 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRCH1Q9Y2L9 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRCH1Q9Y2L9 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LRCH1Q9Y2L9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.8■□□□□ 0.44
LRCH1Q9Y2L9 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRCH1Q9Y2L9 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRCH1Q9Y2L9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRCH1Q9Y2L9 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRCH1Q9Y2L9 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRCH1Q9Y2L9 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.79■□□□□ 0.44
LRCH1Q9Y2L9 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRCH1Q9Y2L9 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRCH1Q9Y2L9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRCH1Q9Y2L9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.79■□□□□ 0.44
LRCH1Q9Y2L9 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.79■□□□□ 0.44
LRCH1Q9Y2L9 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRCH1Q9Y2L9 AL356309.3-201ENST00000624132 1934 ntBASIC17.79■□□□□ 0.44
LRCH1Q9Y2L9 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRCH1Q9Y2L9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.79■□□□□ 0.44
LRCH1Q9Y2L9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.79■□□□□ 0.44
LRCH1Q9Y2L9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.79■□□□□ 0.44
LRCH1Q9Y2L9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.79■□□□□ 0.44
LRCH1Q9Y2L9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.79■□□□□ 0.44
LRCH1Q9Y2L9 IKBKGP1-201ENST00000612193 1073 ntBASIC17.79■□□□□ 0.44
LRCH1Q9Y2L9 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.79■□□□□ 0.44
LRCH1Q9Y2L9 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRCH1Q9Y2L9 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRCH1Q9Y2L9 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LRCH1Q9Y2L9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRCH1Q9Y2L9 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.79■□□□□ 0.44
LRCH1Q9Y2L9 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRCH1Q9Y2L9 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.79■□□□□ 0.44
LRCH1Q9Y2L9 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.79■□□□□ 0.44
LRCH1Q9Y2L9 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRCH1Q9Y2L9 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRCH1Q9Y2L9 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 AC016769.1-201ENST00000409132 1010 ntBASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 AC137761.2-201ENST00000561729 223 ntBASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 AC145350.3-201ENST00000569033 163 ntBASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH1Q9Y2L9 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRCH1Q9Y2L9 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRCH1Q9Y2L9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRCH1Q9Y2L9 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
LRCH1Q9Y2L9 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.77■□□□□ 0.44
LRCH1Q9Y2L9 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
LRCH1Q9Y2L9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.77■□□□□ 0.44
LRCH1Q9Y2L9 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRCH1Q9Y2L9 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.77■□□□□ 0.44
LRCH1Q9Y2L9 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.77■□□□□ 0.44
LRCH1Q9Y2L9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRCH1Q9Y2L9 KRT18P61-201ENST00000585825 1298 ntBASIC17.77■□□□□ 0.44
LRCH1Q9Y2L9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.77■□□□□ 0.44
LRCH1Q9Y2L9 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
LRCH1Q9Y2L9 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.77■□□□□ 0.43
LRCH1Q9Y2L9 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRCH1Q9Y2L9 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LRCH1Q9Y2L9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRCH1Q9Y2L9 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
LRCH1Q9Y2L9 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.77■□□□□ 0.43
LRCH1Q9Y2L9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LRCH1Q9Y2L9 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.77■□□□□ 0.43
LRCH1Q9Y2L9 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.43
LRCH1Q9Y2L9 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRCH1Q9Y2L9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRCH1Q9Y2L9 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms