Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA1Q9UND3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 AP000974.1-201ENST00000623909 2387 ntBASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 TEX21P-204ENST00000641479 1693 ntBASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 SDHAP1-207ENST00000440850 2000 ntBASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPA1Q9UND3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 AC141586.3-201ENST00000562166 1838 ntBASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.24■□□□□ 0.35
NPIPA1Q9UND3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms