Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMCC3Q9ULS5 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.37■□□□□ 0.37
TMCC3Q9ULS5 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMCC3Q9ULS5 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMCC3Q9ULS5 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMCC3Q9ULS5 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMCC3Q9ULS5 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
TMCC3Q9ULS5 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TMCC3Q9ULS5 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMCC3Q9ULS5 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMCC3Q9ULS5 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.37■□□□□ 0.37
TMCC3Q9ULS5 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMCC3Q9ULS5 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMCC3Q9ULS5 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMCC3Q9ULS5 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.37■□□□□ 0.37
TMCC3Q9ULS5 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.37■□□□□ 0.37
TMCC3Q9ULS5 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMCC3Q9ULS5 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.37■□□□□ 0.37
TMCC3Q9ULS5 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.37■□□□□ 0.37
TMCC3Q9ULS5 MYC-209ENST00000641252 345 ntBASIC17.37■□□□□ 0.37
TMCC3Q9ULS5 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TMCC3Q9ULS5 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMCC3Q9ULS5 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMCC3Q9ULS5 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMCC3Q9ULS5 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TMCC3Q9ULS5 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMCC3Q9ULS5 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TMCC3Q9ULS5 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 AC126763.1-201ENST00000552015 2118 ntBASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 TSPY23P-201ENST00000440136 739 ntBASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 PRKY-204ENST00000533551 1019 ntBASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 AL162741.1-201ENST00000565563 1558 ntBASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.36■□□□□ 0.37
TMCC3Q9ULS5 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
TMCC3Q9ULS5 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms