Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
SPASTQ9UBP0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.62■□□□□ 0.57
SPASTQ9UBP0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPASTQ9UBP0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SPASTQ9UBP0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.62■□□□□ 0.57
SPASTQ9UBP0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SPASTQ9UBP0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.62■□□□□ 0.57
SPASTQ9UBP0 AL671277.2-201ENST00000458060 996 ntBASIC18.62■□□□□ 0.57
SPASTQ9UBP0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.62■□□□□ 0.57
SPASTQ9UBP0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
SPASTQ9UBP0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.62■□□□□ 0.57
SPASTQ9UBP0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.62■□□□□ 0.57
SPASTQ9UBP0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.62■□□□□ 0.57
SPASTQ9UBP0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.62■□□□□ 0.57
SPASTQ9UBP0 AP000550.4-202ENST00000639755 178 ntBASIC18.62■□□□□ 0.57
SPASTQ9UBP0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPASTQ9UBP0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SPASTQ9UBP0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SPASTQ9UBP0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.62■□□□□ 0.57
SPASTQ9UBP0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPASTQ9UBP0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPASTQ9UBP0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPASTQ9UBP0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SPASTQ9UBP0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SPASTQ9UBP0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPASTQ9UBP0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPASTQ9UBP0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SPASTQ9UBP0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPASTQ9UBP0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.61■□□□□ 0.57
SPASTQ9UBP0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
SPASTQ9UBP0 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPASTQ9UBP0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SPASTQ9UBP0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.61■□□□□ 0.57
SPASTQ9UBP0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.61■□□□□ 0.57
SPASTQ9UBP0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.61■□□□□ 0.57
SPASTQ9UBP0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.61■□□□□ 0.57
SPASTQ9UBP0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPASTQ9UBP0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
SPASTQ9UBP0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SPASTQ9UBP0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.61■□□□□ 0.57
SPASTQ9UBP0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPASTQ9UBP0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SPASTQ9UBP0 SDHAP1-207ENST00000440850 2000 ntBASIC18.61■□□□□ 0.57
SPASTQ9UBP0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
SPASTQ9UBP0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.6■□□□□ 0.57
SPASTQ9UBP0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPASTQ9UBP0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPASTQ9UBP0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPASTQ9UBP0 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPASTQ9UBP0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPASTQ9UBP0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPASTQ9UBP0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.59■□□□□ 0.57
SPASTQ9UBP0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPASTQ9UBP0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.59■□□□□ 0.57
SPASTQ9UBP0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
SPASTQ9UBP0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.59■□□□□ 0.57
SPASTQ9UBP0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPASTQ9UBP0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SPASTQ9UBP0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
SPASTQ9UBP0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SPASTQ9UBP0 PCED1CP-201ENST00000419887 785 ntBASIC18.59■□□□□ 0.57
SPASTQ9UBP0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.59■□□□□ 0.57
SPASTQ9UBP0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPASTQ9UBP0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.59■□□□□ 0.57
SPASTQ9UBP0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SPASTQ9UBP0 MIR4674-201ENST00000582457 87 ntBASIC18.59■□□□□ 0.57
SPASTQ9UBP0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
SPASTQ9UBP0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.59■□□□□ 0.57
SPASTQ9UBP0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.59■□□□□ 0.57
SPASTQ9UBP0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms