Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.53■■□□□ 1.04
RNF216Q9NWF9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF216Q9NWF9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF216Q9NWF9 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.53■■□□□ 1.04
RNF216Q9NWF9 IL6-201ENST00000258743 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF216Q9NWF9 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF216Q9NWF9 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC21.53■■□□□ 1.04
RNF216Q9NWF9 RN7SL819P-201ENST00000581896 270 ntBASIC21.53■■□□□ 1.04
RNF216Q9NWF9 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.53■■□□□ 1.04
RNF216Q9NWF9 AL035425.4-201ENST00000624509 1063 ntBASIC21.53■■□□□ 1.04
RNF216Q9NWF9 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
RNF216Q9NWF9 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
RNF216Q9NWF9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.53■■□□□ 1.04
RNF216Q9NWF9 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF216Q9NWF9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF216Q9NWF9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF216Q9NWF9 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RNF216Q9NWF9 AC106872.6-201ENST00000514228 1346 ntBASIC21.53■■□□□ 1.04
RNF216Q9NWF9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
RNF216Q9NWF9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 TCEAL1-201ENST00000372624 1164 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 TCEAL1-202ENST00000372625 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 MRPL47-202ENST00000392659 673 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 TMPOP1-202ENST00000424642 1267 ntBASIC21.52■■□□□ 1.04
RNF216Q9NWF9 AC016550.1-201ENST00000505348 785 ntBASIC21.52■■□□□ 1.04
RNF216Q9NWF9 AC110760.3-202ENST00000515177 371 ntBASIC21.52■■□□□ 1.04
RNF216Q9NWF9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 NAPSB-206ENST00000562112 1266 ntBASIC21.52■■□□□ 1.04
RNF216Q9NWF9 AC020978.7-201ENST00000575953 1187 ntBASIC21.52■■□□□ 1.04
RNF216Q9NWF9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 AC026979.4-201ENST00000606555 645 ntBASIC21.52■■□□□ 1.04
RNF216Q9NWF9 AL353770.4-202ENST00000621296 1126 ntTSL 3 BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 BX005040.1-201ENST00000622281 1126 ntTSL 5 BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 AC092865.7-201ENST00000641832 219 ntBASIC21.52■■□□□ 1.04
RNF216Q9NWF9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF216Q9NWF9 AP000974.1-201ENST00000623909 2387 ntBASIC21.52■■□□□ 1.04
RNF216Q9NWF9 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.03
RNF216Q9NWF9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
RNF216Q9NWF9 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF216Q9NWF9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF216Q9NWF9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.51■■□□□ 1.03
RNF216Q9NWF9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF216Q9NWF9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
RNF216Q9NWF9 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF216Q9NWF9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF216Q9NWF9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF216Q9NWF9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.51■■□□□ 1.03
RNF216Q9NWF9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF216Q9NWF9 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF216Q9NWF9 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC21.51■■□□□ 1.03
RNF216Q9NWF9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.51■■□□□ 1.03
RNF216Q9NWF9 CFTRP3-201ENST00000376400 212 ntBASIC21.51■■□□□ 1.03
RNF216Q9NWF9 LIAS-204ENST00000424936 1011 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF216Q9NWF9 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC21.51■■□□□ 1.03
RNF216Q9NWF9 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC21.51■■□□□ 1.03
RNF216Q9NWF9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.51■■□□□ 1.03
RNF216Q9NWF9 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF216Q9NWF9 AC007570.1-201ENST00000539987 603 ntTSL 3 BASIC21.51■■□□□ 1.03
RNF216Q9NWF9 AL731537.2-201ENST00000561565 951 ntBASIC21.51■■□□□ 1.03
RNF216Q9NWF9 AC026271.3-201ENST00000571884 352 ntBASIC21.51■■□□□ 1.03
RNF216Q9NWF9 LINC01892-202ENST00000583985 540 ntTSL 4 BASIC21.51■■□□□ 1.03
RNF216Q9NWF9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF216Q9NWF9 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.51■■□□□ 1.03
RNF216Q9NWF9 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.51■■□□□ 1.03
RNF216Q9NWF9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF216Q9NWF9 KRT18P22-201ENST00000402024 1347 ntBASIC21.51■■□□□ 1.03
RNF216Q9NWF9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF216Q9NWF9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF216Q9NWF9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF216Q9NWF9 AC020763.4-201ENST00000623414 4170 ntBASIC21.51■■□□□ 1.03
RNF216Q9NWF9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF216Q9NWF9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.5■■□□□ 1.03
RNF216Q9NWF9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.5■■□□□ 1.03
RNF216Q9NWF9 LINC01965-201ENST00000412112 1378 ntTSL 3 BASIC21.5■■□□□ 1.03
RNF216Q9NWF9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF216Q9NWF9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF216Q9NWF9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms