Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 MTMR9LP-203ENST00000426597 1545 ntBASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC42SE2Q9NRR3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CDC42SE2Q9NRR3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC12.91□□□□□ -0.34
CDC42SE2Q9NRR3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC42SE2Q9NRR3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC12.91□□□□□ -0.34
CDC42SE2Q9NRR3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC42SE2Q9NRR3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CDC42SE2Q9NRR3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC12.91□□□□□ -0.34
CDC42SE2Q9NRR3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC42SE2Q9NRR3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC42SE2Q9NRR3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC12.91□□□□□ -0.34
CDC42SE2Q9NRR3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC42SE2Q9NRR3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC42SE2Q9NRR3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
CDC42SE2Q9NRR3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC42SE2Q9NRR3 AC069152.1-201ENST00000438030 544 ntBASIC12.91□□□□□ -0.34
CDC42SE2Q9NRR3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC12.91□□□□□ -0.34
CDC42SE2Q9NRR3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC12.91□□□□□ -0.34
CDC42SE2Q9NRR3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CDC42SE2Q9NRR3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC12.91□□□□□ -0.34
CDC42SE2Q9NRR3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC12.91□□□□□ -0.34
CDC42SE2Q9NRR3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC12.91□□□□□ -0.34
CDC42SE2Q9NRR3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC12.91□□□□□ -0.34
CDC42SE2Q9NRR3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC42SE2Q9NRR3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC12.91□□□□□ -0.34
CDC42SE2Q9NRR3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC12.91□□□□□ -0.34
CDC42SE2Q9NRR3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC12.91□□□□□ -0.34
CDC42SE2Q9NRR3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC12.91□□□□□ -0.34
CDC42SE2Q9NRR3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC42SE2Q9NRR3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC42SE2Q9NRR3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC42SE2Q9NRR3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC12.9□□□□□ -0.34
CDC42SE2Q9NRR3 AL499627.1-201ENST00000569373 2188 ntBASIC12.9□□□□□ -0.34
CDC42SE2Q9NRR3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC42SE2Q9NRR3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
CDC42SE2Q9NRR3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC12.9□□□□□ -0.34
CDC42SE2Q9NRR3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC42SE2Q9NRR3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CDC42SE2Q9NRR3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC42SE2Q9NRR3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC12.9□□□□□ -0.34
CDC42SE2Q9NRR3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC42SE2Q9NRR3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDC42SE2Q9NRR3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC12.9□□□□□ -0.34
CDC42SE2Q9NRR3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC12.9□□□□□ -0.34
CDC42SE2Q9NRR3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC12.9□□□□□ -0.34
CDC42SE2Q9NRR3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC12.9□□□□□ -0.34
CDC42SE2Q9NRR3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC12.9□□□□□ -0.34
CDC42SE2Q9NRR3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDC42SE2Q9NRR3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CDC42SE2Q9NRR3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC42SE2Q9NRR3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC42SE2Q9NRR3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC42SE2Q9NRR3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDC42SE2Q9NRR3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CDC42SE2Q9NRR3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
CDC42SE2Q9NRR3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC12.9□□□□□ -0.35
CDC42SE2Q9NRR3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC12.9□□□□□ -0.35
CDC42SE2Q9NRR3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
CDC42SE2Q9NRR3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 AC112777.1-201ENST00000540175 1423 ntBASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 POU5F1P3-201ENST00000428824 1078 ntBASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms