Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC22.97■■□□□ 1.27
UPF2Q9HAU5 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
UPF2Q9HAU5 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
UPF2Q9HAU5 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
UPF2Q9HAU5 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC22.97■■□□□ 1.27
UPF2Q9HAU5 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC22.97■■□□□ 1.27
UPF2Q9HAU5 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC22.97■■□□□ 1.27
UPF2Q9HAU5 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
UPF2Q9HAU5 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC22.97■■□□□ 1.27
UPF2Q9HAU5 AC091874.3-201ENST00000512672 1195 ntBASIC22.97■■□□□ 1.27
UPF2Q9HAU5 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC22.97■■□□□ 1.27
UPF2Q9HAU5 AC092118.2-201ENST00000613495 667 ntBASIC22.97■■□□□ 1.27
UPF2Q9HAU5 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
UPF2Q9HAU5 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC22.97■■□□□ 1.27
UPF2Q9HAU5 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.97■■□□□ 1.27
UPF2Q9HAU5 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC22.97■■□□□ 1.27
UPF2Q9HAU5 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
UPF2Q9HAU5 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
UPF2Q9HAU5 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
UPF2Q9HAU5 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC22.97■■□□□ 1.27
UPF2Q9HAU5 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
UPF2Q9HAU5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
UPF2Q9HAU5 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
UPF2Q9HAU5 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
UPF2Q9HAU5 HEIH-201ENST00000623091 1652 ntBASIC22.97■■□□□ 1.27
UPF2Q9HAU5 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
UPF2Q9HAU5 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
UPF2Q9HAU5 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
UPF2Q9HAU5 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
UPF2Q9HAU5 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
UPF2Q9HAU5 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
UPF2Q9HAU5 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
UPF2Q9HAU5 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC22.96■■□□□ 1.27
UPF2Q9HAU5 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
UPF2Q9HAU5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
UPF2Q9HAU5 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC22.96■■□□□ 1.27
UPF2Q9HAU5 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
UPF2Q9HAU5 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC22.96■■□□□ 1.27
UPF2Q9HAU5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
UPF2Q9HAU5 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC22.96■■□□□ 1.27
UPF2Q9HAU5 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.96■■□□□ 1.27
UPF2Q9HAU5 AC080038.1-201ENST00000611274 1154 ntBASIC22.96■■□□□ 1.27
UPF2Q9HAU5 HLA-B-256ENST00000639848 1089 ntBASIC22.96■■□□□ 1.27
UPF2Q9HAU5 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
UPF2Q9HAU5 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
UPF2Q9HAU5 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC22.96■■□□□ 1.27
UPF2Q9HAU5 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
UPF2Q9HAU5 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
UPF2Q9HAU5 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
UPF2Q9HAU5 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC22.96■■□□□ 1.27
UPF2Q9HAU5 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC22.95■■□□□ 1.27
UPF2Q9HAU5 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
UPF2Q9HAU5 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
UPF2Q9HAU5 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
UPF2Q9HAU5 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
UPF2Q9HAU5 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
UPF2Q9HAU5 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
UPF2Q9HAU5 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.95■■□□□ 1.26
UPF2Q9HAU5 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
UPF2Q9HAU5 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
UPF2Q9HAU5 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC22.95■■□□□ 1.26
UPF2Q9HAU5 TSPY23P-201ENST00000440136 739 ntBASIC22.95■■□□□ 1.26
UPF2Q9HAU5 PXK-206ENST00000463280 2825 ntTSL 2 BASIC22.95■■□□□ 1.26
UPF2Q9HAU5 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.95■■□□□ 1.26
UPF2Q9HAU5 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.95■■□□□ 1.26
UPF2Q9HAU5 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC22.95■■□□□ 1.26
UPF2Q9HAU5 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.95■■□□□ 1.26
UPF2Q9HAU5 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
UPF2Q9HAU5 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.95■■□□□ 1.26
UPF2Q9HAU5 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC22.95■■□□□ 1.26
UPF2Q9HAU5 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.95■■□□□ 1.26
UPF2Q9HAU5 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.95■■□□□ 1.26
UPF2Q9HAU5 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.95■■□□□ 1.26
UPF2Q9HAU5 AC073111.5-205ENST00000641717 521 ntBASIC22.95■■□□□ 1.26
UPF2Q9HAU5 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
UPF2Q9HAU5 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
UPF2Q9HAU5 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
UPF2Q9HAU5 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
UPF2Q9HAU5 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
UPF2Q9HAU5 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
UPF2Q9HAU5 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
UPF2Q9HAU5 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
UPF2Q9HAU5 MIR663A-201ENST00000385250 93 ntBASIC22.94■■□□□ 1.26
UPF2Q9HAU5 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.94■■□□□ 1.26
UPF2Q9HAU5 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.94■■□□□ 1.26
UPF2Q9HAU5 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.94■■□□□ 1.26
UPF2Q9HAU5 AL160286.2-201ENST00000567150 934 ntBASIC22.94■■□□□ 1.26
UPF2Q9HAU5 AC120498.8-201ENST00000614275 531 ntBASIC22.94■■□□□ 1.26
UPF2Q9HAU5 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC22.94■■□□□ 1.26
UPF2Q9HAU5 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
UPF2Q9HAU5 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
UPF2Q9HAU5 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC22.94■■□□□ 1.26
UPF2Q9HAU5 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
UPF2Q9HAU5 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC22.94■■□□□ 1.26
UPF2Q9HAU5 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC22.94■■□□□ 1.26
UPF2Q9HAU5 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
UPF2Q9HAU5 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
UPF2Q9HAU5 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
UPF2Q9HAU5 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC22.93■■□□□ 1.26
UPF2Q9HAU5 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms