Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.27■□□□□ 0.83
CDT1Q9H211 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CDT1Q9H211 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.27■□□□□ 0.83
CDT1Q9H211 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.27■□□□□ 0.83
CDT1Q9H211 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CDT1Q9H211 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.26■□□□□ 0.83
CDT1Q9H211 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CDT1Q9H211 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDT1Q9H211 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDT1Q9H211 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDT1Q9H211 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDT1Q9H211 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDT1Q9H211 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDT1Q9H211 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDT1Q9H211 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.26■□□□□ 0.83
CDT1Q9H211 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CDT1Q9H211 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDT1Q9H211 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDT1Q9H211 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.26■□□□□ 0.83
CDT1Q9H211 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.26■□□□□ 0.83
CDT1Q9H211 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDT1Q9H211 MIR3917-201ENST00000580971 93 ntBASIC20.26■□□□□ 0.83
CDT1Q9H211 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.26■□□□□ 0.83
CDT1Q9H211 AC010240.3-201ENST00000607688 395 ntBASIC20.26■□□□□ 0.83
CDT1Q9H211 AC083849.1-201ENST00000615227 514 ntBASIC20.26■□□□□ 0.83
CDT1Q9H211 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDT1Q9H211 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.26■□□□□ 0.83
CDT1Q9H211 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.26■□□□□ 0.83
CDT1Q9H211 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDT1Q9H211 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDT1Q9H211 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDT1Q9H211 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDT1Q9H211 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.25■□□□□ 0.83
CDT1Q9H211 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.25■□□□□ 0.83
CDT1Q9H211 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDT1Q9H211 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDT1Q9H211 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.25■□□□□ 0.83
CDT1Q9H211 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDT1Q9H211 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDT1Q9H211 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.25■□□□□ 0.83
CDT1Q9H211 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDT1Q9H211 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CDT1Q9H211 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDT1Q9H211 AC092597.1-201ENST00000487352 616 ntBASIC20.25■□□□□ 0.83
CDT1Q9H211 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.25■□□□□ 0.83
CDT1Q9H211 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.25■□□□□ 0.83
CDT1Q9H211 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.25■□□□□ 0.83
CDT1Q9H211 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CDT1Q9H211 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDT1Q9H211 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CDT1Q9H211 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDT1Q9H211 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDT1Q9H211 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.25■□□□□ 0.83
CDT1Q9H211 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CDT1Q9H211 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDT1Q9H211 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CDT1Q9H211 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDT1Q9H211 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDT1Q9H211 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDT1Q9H211 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDT1Q9H211 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.24■□□□□ 0.83
CDT1Q9H211 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.24■□□□□ 0.83
CDT1Q9H211 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.24■□□□□ 0.83
CDT1Q9H211 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDT1Q9H211 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.24■□□□□ 0.83
CDT1Q9H211 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.24■□□□□ 0.83
CDT1Q9H211 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDT1Q9H211 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDT1Q9H211 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDT1Q9H211 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDT1Q9H211 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CDT1Q9H211 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CDT1Q9H211 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDT1Q9H211 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDT1Q9H211 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
CDT1Q9H211 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CDT1Q9H211 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDT1Q9H211 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDT1Q9H211 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.24■□□□□ 0.83
CDT1Q9H211 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDT1Q9H211 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CDT1Q9H211 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDT1Q9H211 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CDT1Q9H211 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.23■□□□□ 0.83
CDT1Q9H211 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CDT1Q9H211 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDT1Q9H211 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDT1Q9H211 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CDT1Q9H211 SPDYE13P-201ENST00000445314 798 ntBASIC20.23■□□□□ 0.83
CDT1Q9H211 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.23■□□□□ 0.83
CDT1Q9H211 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CDT1Q9H211 KRT8P50-201ENST00000562022 1438 ntBASIC20.23■□□□□ 0.83
CDT1Q9H211 LINC01311-201ENST00000565162 1445 ntBASIC20.23■□□□□ 0.83
CDT1Q9H211 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.23■□□□□ 0.83
CDT1Q9H211 AC079602.3-201ENST00000623931 403 ntBASIC20.23■□□□□ 0.83
CDT1Q9H211 AL121956.5-201ENST00000625261 221 ntBASIC20.23■□□□□ 0.83
CDT1Q9H211 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDT1Q9H211 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.23■□□□□ 0.83
CDT1Q9H211 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CDT1Q9H211 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms