Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 BTBD19-205ENST00000475105 505 ntTSL 423.57■■□□□ 1.362e-15■■■□□ 18
XRN2Q9H0D6 USP32-208ENST00000589335 691 ntTSL 523.53■■□□□ 1.361e-5■■■□□ 18
XRN2Q9H0D6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC23.5■■□□□ 1.351e-5■■■□□ 18
XRN2Q9H0D6 FPGS-217ENST00000488506 649 ntTSL 523.5■■□□□ 1.351e-5■■■□□ 18
XRN2Q9H0D6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.342e-10■■■□□ 18
XRN2Q9H0D6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.341e-5■■■□□ 18
XRN2Q9H0D6 SPATA2L-203ENST00000569918 692 ntTSL 223.31■■□□□ 1.321e-5■■■□□ 18
XRN2Q9H0D6 ANAPC1-206ENST00000467878 580 ntTSL 223.28■■□□□ 1.321e-5■■■□□ 18
XRN2Q9H0D6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC23.27■■□□□ 1.321e-5■■■□□ 18
XRN2Q9H0D6 MARC2-204ENST00000469583 758 ntTSL 323.26■■□□□ 1.311e-5■■■□□ 18
XRN2Q9H0D6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.16■■□□□ 1.31e-5■■■□□ 18
XRN2Q9H0D6 AHCY-206ENST00000606061 1170 ntTSL 223.15■■□□□ 1.31e-5■■■□□ 18
XRN2Q9H0D6 TBCB-208ENST00000588385 776 ntTSL 1 (best)23.09■■□□□ 1.291e-5■■■□□ 18
XRN2Q9H0D6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.281e-5■■■□□ 18
XRN2Q9H0D6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.281e-5■■■□□ 18
XRN2Q9H0D6 ARRDC1-211ENST00000495220 747 ntTSL 223.02■■□□□ 1.281e-5■■■□□ 18
XRN2Q9H0D6 DMKN-225ENST00000464894 754 ntTSL 522.96■■□□□ 1.271e-5■■■□□ 18
XRN2Q9H0D6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.261e-5■■■□□ 18
XRN2Q9H0D6 CHID1-220ENST00000532909 619 ntTSL 522.92■■□□□ 1.265e-8■■■□□ 18
XRN2Q9H0D6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC22.87■■□□□ 1.255e-8■■■□□ 18
XRN2Q9H0D6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.252e-15■■■□□ 18
XRN2Q9H0D6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC22.75■■□□□ 1.232e-10■■■□□ 18
XRN2Q9H0D6 TBCB-209ENST00000589308 659 ntTSL 322.74■■□□□ 1.231e-5■■■□□ 18
XRN2Q9H0D6 CERS4-213ENST00000561053 768 ntTSL 522.63■■□□□ 1.211e-5■■■□□ 18
XRN2Q9H0D6 DHX30-208ENST00000461905 591 ntTSL 222.63■■□□□ 1.211e-5■■■□□ 18
XRN2Q9H0D6 UPF1-212ENST00000601689 561 ntTSL 422.61■■□□□ 1.211e-5■■■□□ 18
XRN2Q9H0D6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.21e-5■■■□□ 18
XRN2Q9H0D6 NADK-213ENST00000492845 937 ntTSL 222.32■■□□□ 1.162e-10■■■□□ 18
XRN2Q9H0D6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.155e-8■■■□□ 18
XRN2Q9H0D6 C15orf40-203ENST00000505341 1881 ntTSL 222.23■■□□□ 1.151e-5■■■□□ 18
XRN2Q9H0D6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.151e-5■■■□□ 18
XRN2Q9H0D6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC22.18■■□□□ 1.141e-5■■■□□ 18
XRN2Q9H0D6 STXBP2-205ENST00000593854 704 ntTSL 222.03■■□□□ 1.121e-5■■■□□ 18
XRN2Q9H0D6 ANAPC1-209ENST00000489177 1809 ntTSL 522.01■■□□□ 1.111e-5■■■□□ 18
XRN2Q9H0D6 PUF60-219ENST00000532127 604 ntTSL 222■■□□□ 1.115e-8■■■□□ 18
XRN2Q9H0D6 CD99-206ENST00000449611 604 ntAPPRIS ALT2 TSL 522■■□□□ 1.111e-5■■■□□ 18
XRN2Q9H0D6 ARRDC1-203ENST00000431925 555 ntTSL 321.98■■□□□ 1.111e-5■■■□□ 18
XRN2Q9H0D6 DMKN-261ENST00000498593 609 ntTSL 221.97■■□□□ 1.111e-5■■■□□ 18
XRN2Q9H0D6 DMKN-214ENST00000450261 364 ntAPPRIS ALT2 TSL 521.97■■□□□ 1.111e-5■■■□□ 18
XRN2Q9H0D6 DMKN-236ENST00000472065 426 ntTSL 421.96■■□□□ 1.111e-5■■■□□ 18
XRN2Q9H0D6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.11e-5■■■□□ 18
XRN2Q9H0D6 ARRDC1-209ENST00000483563 704 ntTSL 321.88■■□□□ 1.091e-5■■■□□ 18
XRN2Q9H0D6 DMKN-217ENST00000460051 630 ntTSL 1 (best)21.78■■□□□ 1.081e-5■■■□□ 18
XRN2Q9H0D6 DMKN-235ENST00000471786 751 ntTSL 321.78■■□□□ 1.081e-5■■■□□ 18
XRN2Q9H0D6 SH3TC1-214ENST00000508183 1410 ntTSL 1 (best)21.78■■□□□ 1.085e-8■■■□□ 18
XRN2Q9H0D6 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.061e-5■■■□□ 18
XRN2Q9H0D6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.61■■□□□ 1.051e-5■■■□□ 18
XRN2Q9H0D6 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.59■■□□□ 1.051e-5■■■□□ 18
XRN2Q9H0D6 CERS4-206ENST00000558501 873 ntTSL 521.59■■□□□ 1.051e-5■■■□□ 18
XRN2Q9H0D6 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.58■■□□□ 1.051e-5■■■□□ 18
XRN2Q9H0D6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.55■■□□□ 1.041e-7■■■□□ 18
XRN2Q9H0D6 PRKRA-209ENST00000470200 550 ntTSL 421.55■■□□□ 1.041e-5■■■□□ 18
XRN2Q9H0D6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.031e-5■■■□□ 18
XRN2Q9H0D6 SREK1-207ENST00000520058 559 ntTSL 221.5■■□□□ 1.031e-5■■■□□ 18
XRN2Q9H0D6 AL157392.3-203ENST00000615691 921 ntTSL 521.43■■□□□ 1.021e-5■■■□□ 18
XRN2Q9H0D6 ZNF202-209ENST00000533463 855 ntTSL 321.39■■□□□ 1.011e-5■■■□□ 18
XRN2Q9H0D6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.011e-5■■■□□ 18
XRN2Q9H0D6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 11e-7■■■□□ 18
XRN2Q9H0D6 SARM1-201ENST00000379061 1921 ntTSL 221.27■■□□□ 15e-8■■■□□ 18
XRN2Q9H0D6 MAPK8-210ENST00000432379 907 ntTSL 321.18■□□□□ 0.981e-5■■■□□ 18
XRN2Q9H0D6 LAMA5-208ENST00000474128 579 ntTSL 321.14■□□□□ 0.971e-5■■■□□ 18
XRN2Q9H0D6 SLC19A1-208ENST00000468508 1435 ntTSL 221.13■□□□□ 0.971e-5■■■□□ 18
XRN2Q9H0D6 LRCH1-204ENST00000443945 2070 ntTSL 1 (best)21.09■□□□□ 0.971e-5■■■□□ 18
XRN2Q9H0D6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.961e-7■■■□□ 18
XRN2Q9H0D6 DDX41-217ENST00000515562 1184 ntTSL 1 (best)21.02■□□□□ 0.961e-5■■■□□ 18
XRN2Q9H0D6 TSNARE1-207ENST00000521825 346 ntTSL 321.01■□□□□ 0.952e-10■■■□□ 18
XRN2Q9H0D6 PKD1-238ENST00000570150 571 ntTSL 520.95■□□□□ 0.941e-5■■■□□ 18
XRN2Q9H0D6 CNOT6-203ENST00000502447 552 ntTSL 320.92■□□□□ 0.945e-8■■■□□ 18
XRN2Q9H0D6 WDR73-208ENST00000559126 2031 ntTSL 220.75■□□□□ 0.911e-5■■■□□ 18
XRN2Q9H0D6 TYK2-213ENST00000529739 842 ntTSL 220.74■□□□□ 0.912e-6■■■□□ 18
XRN2Q9H0D6 QTRT1-208ENST00000590705 846 ntTSL 320.64■□□□□ 0.891e-5■■■□□ 18
XRN2Q9H0D6 QTRT1-203ENST00000585885 875 ntTSL 320.64■□□□□ 0.891e-5■■■□□ 18
XRN2Q9H0D6 LINC01529-202ENST00000564335 844 ntTSL 320.59■□□□□ 0.895e-8■■■□□ 18
XRN2Q9H0D6 PI4KA-203ENST00000449120 574 ntTSL 420.54■□□□□ 0.881e-5■■■□□ 18
XRN2Q9H0D6 RAVER1-202ENST00000585935 470 ntTSL 320.51■□□□□ 0.871e-5■■■□□ 18
XRN2Q9H0D6 CERS4-211ENST00000560412 568 ntTSL 420.51■□□□□ 0.871e-5■■■□□ 18
XRN2Q9H0D6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.871e-5■■■□□ 18
XRN2Q9H0D6 IPO4-212ENST00000560222 573 ntTSL 320.41■□□□□ 0.865e-8■■■□□ 18
XRN2Q9H0D6 AL157392.3-224ENST00000620849 765 ntTSL 520.39■□□□□ 0.851e-5■■■□□ 18
XRN2Q9H0D6 CHID1-223ENST00000534207 1171 ntTSL 520.39■□□□□ 0.855e-8■■■□□ 18
XRN2Q9H0D6 PC-210ENST00000530187 621 ntTSL 320.39■□□□□ 0.851e-5■■■□□ 18
XRN2Q9H0D6 NCL-202ENST00000356936 890 ntTSL 320.32■□□□□ 0.841e-5■■■□□ 18
XRN2Q9H0D6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.841e-5■■■□□ 18
XRN2Q9H0D6 DPH7-207ENST00000475100 919 ntTSL 320.29■□□□□ 0.841e-5■■■□□ 18
XRN2Q9H0D6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.841e-5■■■□□ 18
XRN2Q9H0D6 GLI4-205ENST00000519876 585 ntTSL 320.28■□□□□ 0.841e-5■■■□□ 18
XRN2Q9H0D6 PRKRA-208ENST00000466165 585 ntTSL 220.27■□□□□ 0.841e-5■■■□□ 18
XRN2Q9H0D6 DPH7-210ENST00000479650 1797 ntTSL 520.16■□□□□ 0.821e-5■■■□□ 18
XRN2Q9H0D6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.13■□□□□ 0.811e-5■■■□□ 18
XRN2Q9H0D6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.08■□□□□ 0.811e-5■■■□□ 18
XRN2Q9H0D6 RRP1-206ENST00000492638 1017 ntTSL 220.07■□□□□ 0.81e-5■■■□□ 18
XRN2Q9H0D6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.81e-5■■■□□ 18
XRN2Q9H0D6 POLRMT-206ENST00000590709 1106 ntTSL 220.04■□□□□ 0.81e-5■■■□□ 18
XRN2Q9H0D6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.781e-5■■■□□ 18
XRN2Q9H0D6 CD99-211ENST00000623253 573 ntTSL 1 (best)19.93■□□□□ 0.781e-5■■■□□ 18
XRN2Q9H0D6 SLC43A1-208ENST00000533263 690 ntTSL 519.9■□□□□ 0.781e-5■■■□□ 18
XRN2Q9H0D6 KRIT1-210ENST00000430102 702 ntTSL 319.76■□□□□ 0.751e-5■■■□□ 18
XRN2Q9H0D6 SREK1-214ENST00000523851 458 ntTSL 319.76■□□□□ 0.751e-5■■■□□ 18
XRN2Q9H0D6 FPGS-207ENST00000460181 2206 ntTSL 1 (best)19.75■□□□□ 0.751e-5■■■□□ 18
XRN2Q9H0D6 NADK-208ENST00000477235 1004 ntTSL 219.7■□□□□ 0.742e-10■■■□□ 18
Retrieved 100 of 21,068 protein–RNA pairs in 22.7 ms