Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.64■□□□□ 0.57
LRFN3Q9BTN0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRFN3Q9BTN0 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.64■□□□□ 0.57
LRFN3Q9BTN0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
LRFN3Q9BTN0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.64■□□□□ 0.57
LRFN3Q9BTN0 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRFN3Q9BTN0 MKNK2P1-201ENST00000437526 628 ntBASIC18.64■□□□□ 0.57
LRFN3Q9BTN0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRFN3Q9BTN0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.64■□□□□ 0.57
LRFN3Q9BTN0 AC004449.1-201ENST00000564240 433 ntBASIC18.64■□□□□ 0.57
LRFN3Q9BTN0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.64■□□□□ 0.57
LRFN3Q9BTN0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.64■□□□□ 0.57
LRFN3Q9BTN0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.64■□□□□ 0.57
LRFN3Q9BTN0 FP700111.2-201ENST00000619190 1892 ntBASIC18.64■□□□□ 0.57
LRFN3Q9BTN0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRFN3Q9BTN0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.64■□□□□ 0.57
LRFN3Q9BTN0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRFN3Q9BTN0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.64■□□□□ 0.57
LRFN3Q9BTN0 HOXB1-202ENST00000577092 1414 ntBASIC18.64■□□□□ 0.57
LRFN3Q9BTN0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRFN3Q9BTN0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRFN3Q9BTN0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.63■□□□□ 0.57
LRFN3Q9BTN0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRFN3Q9BTN0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRFN3Q9BTN0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
LRFN3Q9BTN0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.63■□□□□ 0.57
LRFN3Q9BTN0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRFN3Q9BTN0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LRFN3Q9BTN0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRFN3Q9BTN0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRFN3Q9BTN0 MEIS3P1-201ENST00000495167 958 ntBASIC18.63■□□□□ 0.57
LRFN3Q9BTN0 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.63■□□□□ 0.57
LRFN3Q9BTN0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.63■□□□□ 0.57
LRFN3Q9BTN0 AL359881.2-201ENST00000602973 570 ntBASIC18.63■□□□□ 0.57
LRFN3Q9BTN0 AC107918.4-202ENST00000641623 219 ntBASIC18.63■□□□□ 0.57
LRFN3Q9BTN0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRFN3Q9BTN0 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.63■□□□□ 0.57
LRFN3Q9BTN0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRFN3Q9BTN0 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRFN3Q9BTN0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRFN3Q9BTN0 AL049796.1-201ENST00000565336 1766 ntBASIC18.63■□□□□ 0.57
LRFN3Q9BTN0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
LRFN3Q9BTN0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LRFN3Q9BTN0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRFN3Q9BTN0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRFN3Q9BTN0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRFN3Q9BTN0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRFN3Q9BTN0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.62■□□□□ 0.57
LRFN3Q9BTN0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRFN3Q9BTN0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRFN3Q9BTN0 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.62■□□□□ 0.57
LRFN3Q9BTN0 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.62■□□□□ 0.57
LRFN3Q9BTN0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
LRFN3Q9BTN0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRFN3Q9BTN0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.62■□□□□ 0.57
LRFN3Q9BTN0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.62■□□□□ 0.57
LRFN3Q9BTN0 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LRFN3Q9BTN0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.62■□□□□ 0.57
LRFN3Q9BTN0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.62■□□□□ 0.57
LRFN3Q9BTN0 AL513190.1-201ENST00000621254 727 ntBASIC18.62■□□□□ 0.57
LRFN3Q9BTN0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRFN3Q9BTN0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.62■□□□□ 0.57
LRFN3Q9BTN0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRFN3Q9BTN0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.62■□□□□ 0.57
LRFN3Q9BTN0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRFN3Q9BTN0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRFN3Q9BTN0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.62■□□□□ 0.57
LRFN3Q9BTN0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRFN3Q9BTN0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRFN3Q9BTN0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRFN3Q9BTN0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRFN3Q9BTN0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.61■□□□□ 0.57
LRFN3Q9BTN0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
LRFN3Q9BTN0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRFN3Q9BTN0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.61■□□□□ 0.57
LRFN3Q9BTN0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRFN3Q9BTN0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.61■□□□□ 0.57
LRFN3Q9BTN0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRFN3Q9BTN0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LRFN3Q9BTN0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.61■□□□□ 0.57
LRFN3Q9BTN0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRFN3Q9BTN0 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.61■□□□□ 0.57
LRFN3Q9BTN0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRFN3Q9BTN0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.61■□□□□ 0.57
LRFN3Q9BTN0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.61■□□□□ 0.57
LRFN3Q9BTN0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.61■□□□□ 0.57
LRFN3Q9BTN0 AL078644.1-201ENST00000609881 752 ntBASIC18.61■□□□□ 0.57
LRFN3Q9BTN0 AC092865.6-201ENST00000642101 219 ntBASIC18.61■□□□□ 0.57
LRFN3Q9BTN0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRFN3Q9BTN0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.61■□□□□ 0.57
LRFN3Q9BTN0 AC012676.1-201ENST00000574705 1949 ntBASIC18.61■□□□□ 0.57
LRFN3Q9BTN0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRFN3Q9BTN0 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRFN3Q9BTN0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.6■□□□□ 0.57
LRFN3Q9BTN0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRFN3Q9BTN0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.6■□□□□ 0.57
LRFN3Q9BTN0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRFN3Q9BTN0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRFN3Q9BTN0 KRT89P-201ENST00000620027 1478 ntBASIC18.6■□□□□ 0.57
LRFN3Q9BTN0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms