Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.68■□□□□ 0.1
CCL13Q99616 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL13Q99616 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL13Q99616 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL13Q99616 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.67■□□□□ 0.1
CCL13Q99616 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.67■□□□□ 0.1
CCL13Q99616 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL13Q99616 HEIH-201ENST00000623091 1652 ntBASIC15.67■□□□□ 0.1
CCL13Q99616 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL13Q99616 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL13Q99616 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL13Q99616 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL13Q99616 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
CCL13Q99616 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.67■□□□□ 0.1
CCL13Q99616 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.67■□□□□ 0.1
CCL13Q99616 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CCL13Q99616 HMGA1P5-201ENST00000412453 271 ntBASIC15.67■□□□□ 0.1
CCL13Q99616 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.67■□□□□ 0.1
CCL13Q99616 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.67■□□□□ 0.1
CCL13Q99616 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.67■□□□□ 0.1
CCL13Q99616 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.67■□□□□ 0.1
CCL13Q99616 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL13Q99616 AC012306.2-201ENST00000609350 630 ntBASIC15.67■□□□□ 0.1
CCL13Q99616 AC068587.9-201ENST00000641814 219 ntBASIC15.67■□□□□ 0.1
CCL13Q99616 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL13Q99616 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
CCL13Q99616 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL13Q99616 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL13Q99616 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL13Q99616 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL13Q99616 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.67■□□□□ 0.1
CCL13Q99616 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL13Q99616 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL13Q99616 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL13Q99616 AC008556.1-201ENST00000610908 2040 ntBASIC15.67■□□□□ 0.1
CCL13Q99616 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCL13Q99616 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL13Q99616 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.66■□□□□ 0.1
CCL13Q99616 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL13Q99616 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCL13Q99616 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.66■□□□□ 0.1
CCL13Q99616 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
CCL13Q99616 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL13Q99616 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.66■□□□□ 0.1
CCL13Q99616 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.66■□□□□ 0.1
CCL13Q99616 SLC25A3P1-201ENST00000443844 931 ntBASIC15.66■□□□□ 0.1
CCL13Q99616 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.66■□□□□ 0.1
CCL13Q99616 AC005363.2-201ENST00000618631 242 ntBASIC15.66■□□□□ 0.1
CCL13Q99616 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL13Q99616 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL13Q99616 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL13Q99616 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL13Q99616 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.66■□□□□ 0.1
CCL13Q99616 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.66■□□□□ 0.1
CCL13Q99616 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.66■□□□□ 0.1
CCL13Q99616 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL13Q99616 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCL13Q99616 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL13Q99616 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.66■□□□□ 0.1
CCL13Q99616 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL13Q99616 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL13Q99616 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCL13Q99616 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL13Q99616 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL13Q99616 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.65■□□□□ 0.1
CCL13Q99616 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL13Q99616 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL13Q99616 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL13Q99616 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL13Q99616 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL13Q99616 TNXA-203ENST00000507684 2038 ntBASIC15.65■□□□□ 0.1
CCL13Q99616 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL13Q99616 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CCL13Q99616 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL13Q99616 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL13Q99616 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL13Q99616 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL13Q99616 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.65■□□□□ 0.1
CCL13Q99616 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL13Q99616 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.65■□□□□ 0.1
CCL13Q99616 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL13Q99616 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.65■□□□□ 0.1
CCL13Q99616 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CCL13Q99616 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CCL13Q99616 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL13Q99616 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL13Q99616 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL13Q99616 KRT8P45-201ENST00000414328 1447 ntBASIC15.65■□□□□ 0.1
CCL13Q99616 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.65■□□□□ 0.1
CCL13Q99616 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL13Q99616 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL13Q99616 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL13Q99616 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL13Q99616 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL13Q99616 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL13Q99616 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL13Q99616 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.64■□□□□ 0.09
CCL13Q99616 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CCL13Q99616 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL13Q99616 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms