Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RITA1Q96K30 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.03■□□□□ -0
RITA1Q96K30 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
RITA1Q96K30 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.03■□□□□ -0
RITA1Q96K30 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.03■□□□□ -0
RITA1Q96K30 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RITA1Q96K30 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RITA1Q96K30 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
RITA1Q96K30 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
RITA1Q96K30 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RITA1Q96K30 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RITA1Q96K30 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.03■□□□□ -0
RITA1Q96K30 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.03■□□□□ -0
RITA1Q96K30 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RITA1Q96K30 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.03■□□□□ -0
RITA1Q96K30 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.03■□□□□ -0
RITA1Q96K30 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.03■□□□□ -0
RITA1Q96K30 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.03■□□□□ -0
RITA1Q96K30 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.03■□□□□ -0
RITA1Q96K30 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.03■□□□□ -0
RITA1Q96K30 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RITA1Q96K30 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RITA1Q96K30 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RITA1Q96K30 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RITA1Q96K30 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RITA1Q96K30 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.03■□□□□ -0
RITA1Q96K30 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.03■□□□□ -0
RITA1Q96K30 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RITA1Q96K30 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.03■□□□□ -0
RITA1Q96K30 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.03■□□□□ -0
RITA1Q96K30 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RITA1Q96K30 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RITA1Q96K30 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RITA1Q96K30 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
RITA1Q96K30 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.02■□□□□ -0
RITA1Q96K30 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RITA1Q96K30 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RITA1Q96K30 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RITA1Q96K30 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.02■□□□□ -0
RITA1Q96K30 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
RITA1Q96K30 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
RITA1Q96K30 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RITA1Q96K30 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.02■□□□□ -0
RITA1Q96K30 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RITA1Q96K30 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.02■□□□□ -0
RITA1Q96K30 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.02■□□□□ -0
RITA1Q96K30 CA15P1-201ENST00000481698 905 ntBASIC15.02■□□□□ -0
RITA1Q96K30 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.02■□□□□ -0
RITA1Q96K30 AP003041.3-201ENST00000527151 707 ntBASIC15.02■□□□□ -0
RITA1Q96K30 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.02■□□□□ -0
RITA1Q96K30 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.02■□□□□ -0
RITA1Q96K30 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.02□□□□□ -0.01
RITA1Q96K30 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
RITA1Q96K30 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
RITA1Q96K30 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RITA1Q96K30 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RITA1Q96K30 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
RITA1Q96K30 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RITA1Q96K30 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RITA1Q96K30 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.02□□□□□ -0.01
RITA1Q96K30 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RITA1Q96K30 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.02□□□□□ -0.01
RITA1Q96K30 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RITA1Q96K30 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RITA1Q96K30 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RITA1Q96K30 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RITA1Q96K30 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RITA1Q96K30 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RITA1Q96K30 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RITA1Q96K30 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RITA1Q96K30 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RITA1Q96K30 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RITA1Q96K30 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RITA1Q96K30 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RITA1Q96K30 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.01□□□□□ -0.01
RITA1Q96K30 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.01□□□□□ -0.01
RITA1Q96K30 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RITA1Q96K30 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.01□□□□□ -0.01
RITA1Q96K30 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RITA1Q96K30 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RITA1Q96K30 AL109659.2-201ENST00000606809 1674 ntBASIC15.01□□□□□ -0.01
RITA1Q96K30 MMP23A-201ENST00000234610 1017 ntBASIC15.01□□□□□ -0.01
RITA1Q96K30 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.01□□□□□ -0.01
RITA1Q96K30 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.01□□□□□ -0.01
RITA1Q96K30 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.01□□□□□ -0.01
RITA1Q96K30 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RITA1Q96K30 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.01□□□□□ -0.01
RITA1Q96K30 AL353719.1-201ENST00000566847 864 ntBASIC15.01□□□□□ -0.01
RITA1Q96K30 AC010947.1-201ENST00000623454 693 ntBASIC15.01□□□□□ -0.01
RITA1Q96K30 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RITA1Q96K30 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.01□□□□□ -0.01
RITA1Q96K30 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RITA1Q96K30 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RITA1Q96K30 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.01□□□□□ -0.01
RITA1Q96K30 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RITA1Q96K30 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.01□□□□□ -0.01
RITA1Q96K30 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RITA1Q96K30 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.01□□□□□ -0.01
RITA1Q96K30 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15□□□□□ -0.01
RITA1Q96K30 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms