Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC58Q96CX6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC58Q96CX6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC58Q96CX6 SLC29A4P1-201ENST00000398760 971 ntBASIC17.82■□□□□ 0.44
LRRC58Q96CX6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.82■□□□□ 0.44
LRRC58Q96CX6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC58Q96CX6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.82■□□□□ 0.44
LRRC58Q96CX6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
LRRC58Q96CX6 MYC-208ENST00000641036 567 ntBASIC17.82■□□□□ 0.44
LRRC58Q96CX6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC58Q96CX6 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.82■□□□□ 0.44
LRRC58Q96CX6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC58Q96CX6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC58Q96CX6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC58Q96CX6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC58Q96CX6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
LRRC58Q96CX6 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC58Q96CX6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC58Q96CX6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.82■□□□□ 0.44
LRRC58Q96CX6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC58Q96CX6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC58Q96CX6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
LRRC58Q96CX6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC58Q96CX6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC58Q96CX6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC58Q96CX6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LRRC58Q96CX6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC58Q96CX6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC58Q96CX6 GUSBP6-202ENST00000438529 1198 ntBASIC17.81■□□□□ 0.44
LRRC58Q96CX6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC58Q96CX6 C1QL1P1-201ENST00000568105 661 ntBASIC17.81■□□□□ 0.44
LRRC58Q96CX6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC58Q96CX6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC58Q96CX6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.81■□□□□ 0.44
LRRC58Q96CX6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC58Q96CX6 AC134043.2-201ENST00000624206 2238 ntBASIC17.81■□□□□ 0.44
LRRC58Q96CX6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC58Q96CX6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRC58Q96CX6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
LRRC58Q96CX6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC58Q96CX6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC58Q96CX6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC58Q96CX6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC58Q96CX6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRC58Q96CX6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.81■□□□□ 0.44
LRRC58Q96CX6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRC58Q96CX6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.81■□□□□ 0.44
LRRC58Q96CX6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LRRC58Q96CX6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC58Q96CX6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.8■□□□□ 0.44
LRRC58Q96CX6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC58Q96CX6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
LRRC58Q96CX6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LRRC58Q96CX6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC58Q96CX6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC58Q96CX6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
LRRC58Q96CX6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC58Q96CX6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
LRRC58Q96CX6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.8■□□□□ 0.44
LRRC58Q96CX6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC58Q96CX6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.8■□□□□ 0.44
LRRC58Q96CX6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.8■□□□□ 0.44
LRRC58Q96CX6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.8■□□□□ 0.44
LRRC58Q96CX6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC58Q96CX6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
LRRC58Q96CX6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.8■□□□□ 0.44
LRRC58Q96CX6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC58Q96CX6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC58Q96CX6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.8■□□□□ 0.44
LRRC58Q96CX6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
LRRC58Q96CX6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.8■□□□□ 0.44
LRRC58Q96CX6 AC093677.2-201ENST00000600169 1863 ntBASIC17.8■□□□□ 0.44
LRRC58Q96CX6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.79■□□□□ 0.44
LRRC58Q96CX6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC58Q96CX6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC58Q96CX6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC58Q96CX6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC58Q96CX6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC58Q96CX6 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC58Q96CX6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.79■□□□□ 0.44
LRRC58Q96CX6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC58Q96CX6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LRRC58Q96CX6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC58Q96CX6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC58Q96CX6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC58Q96CX6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
LRRC58Q96CX6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC58Q96CX6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.79■□□□□ 0.44
LRRC58Q96CX6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
LRRC58Q96CX6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC58Q96CX6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC58Q96CX6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LRRC58Q96CX6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC58Q96CX6 AC006970.2-201ENST00000450065 779 ntBASIC17.79■□□□□ 0.44
LRRC58Q96CX6 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.79■□□□□ 0.44
LRRC58Q96CX6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC58Q96CX6 LINC00896-202ENST00000609602 2128 ntBASIC17.79■□□□□ 0.44
LRRC58Q96CX6 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.79■□□□□ 0.44
LRRC58Q96CX6 KRT8P32-201ENST00000512863 1461 ntBASIC17.79■□□□□ 0.44
LRRC58Q96CX6 GNAS-203ENST00000306120 1878 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms