Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CHCHD1Q96BP2 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
CHCHD1Q96BP2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHCHD1Q96BP2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHCHD1Q96BP2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHCHD1Q96BP2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHCHD1Q96BP2 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHCHD1Q96BP2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CHCHD1Q96BP2 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 DUX4L2-201ENST00000561772 1275 ntBASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 DUX4L6-201ENST00000626483 1275 ntBASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 DUX4L1-201ENST00000627662 1275 ntBASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 DUX4L8-201ENST00000629013 1275 ntBASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 DUX4L3-201ENST00000630187 1275 ntBASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 DUX4L7-201ENST00000630678 1275 ntBASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 DUX4L5-201ENST00000630834 1275 ntBASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHCHD1Q96BP2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 AL512631.2-201ENST00000604634 923 ntBASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 AC012354.3-201ENST00000623734 483 ntBASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 AP001094.4-201ENST00000579008 2176 ntBASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
CHCHD1Q96BP2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms