Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTP4A1Q93096 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTP4A1Q93096 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTP4A1Q93096 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
PTP4A1Q93096 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTP4A1Q93096 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTP4A1Q93096 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.81■□□□□ 0.28
PTP4A1Q93096 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.81■□□□□ 0.28
PTP4A1Q93096 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A1Q93096 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A1Q93096 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.81■□□□□ 0.28
PTP4A1Q93096 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A1Q93096 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PTP4A1Q93096 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.81■□□□□ 0.28
PTP4A1Q93096 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.81■□□□□ 0.28
PTP4A1Q93096 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A1Q93096 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A1Q93096 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A1Q93096 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PTP4A1Q93096 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.81■□□□□ 0.28
PTP4A1Q93096 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PTP4A1Q93096 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A1Q93096 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A1Q93096 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A1Q93096 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A1Q93096 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.81■□□□□ 0.28
PTP4A1Q93096 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PTP4A1Q93096 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A1Q93096 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.81■□□□□ 0.28
PTP4A1Q93096 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A1Q93096 AC133681.1-201ENST00000465482 601 ntBASIC16.81■□□□□ 0.28
PTP4A1Q93096 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.81■□□□□ 0.28
PTP4A1Q93096 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A1Q93096 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A1Q93096 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.81■□□□□ 0.28
PTP4A1Q93096 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PTP4A1Q93096 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PTP4A1Q93096 AC110285.5-201ENST00000611501 352 ntBASIC16.81■□□□□ 0.28
PTP4A1Q93096 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A1Q93096 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.81■□□□□ 0.28
PTP4A1Q93096 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A1Q93096 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A1Q93096 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A1Q93096 AP000997.3-201ENST00000623333 2250 ntBASIC16.81■□□□□ 0.28
PTP4A1Q93096 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
PTP4A1Q93096 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PTP4A1Q93096 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.81■□□□□ 0.28
PTP4A1Q93096 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTP4A1Q93096 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTP4A1Q93096 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTP4A1Q93096 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PTP4A1Q93096 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PTP4A1Q93096 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.8■□□□□ 0.28
PTP4A1Q93096 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTP4A1Q93096 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTP4A1Q93096 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.8■□□□□ 0.28
PTP4A1Q93096 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.8■□□□□ 0.28
PTP4A1Q93096 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTP4A1Q93096 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTP4A1Q93096 KRASP1-201ENST00000407852 552 ntBASIC16.8■□□□□ 0.28
PTP4A1Q93096 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTP4A1Q93096 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTP4A1Q93096 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.8■□□□□ 0.28
PTP4A1Q93096 C1QBPP2-201ENST00000528754 825 ntBASIC16.8■□□□□ 0.28
PTP4A1Q93096 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PTP4A1Q93096 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PTP4A1Q93096 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.8■□□□□ 0.28
PTP4A1Q93096 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PTP4A1Q93096 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PTP4A1Q93096 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTP4A1Q93096 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTP4A1Q93096 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PTP4A1Q93096 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTP4A1Q93096 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTP4A1Q93096 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PTP4A1Q93096 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.8■□□□□ 0.28
PTP4A1Q93096 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTP4A1Q93096 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.79■□□□□ 0.28
PTP4A1Q93096 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PTP4A1Q93096 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTP4A1Q93096 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTP4A1Q93096 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTP4A1Q93096 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTP4A1Q93096 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PTP4A1Q93096 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTP4A1Q93096 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.79■□□□□ 0.28
PTP4A1Q93096 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTP4A1Q93096 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTP4A1Q93096 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.79■□□□□ 0.28
PTP4A1Q93096 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTP4A1Q93096 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTP4A1Q93096 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
PTP4A1Q93096 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTP4A1Q93096 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTP4A1Q93096 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PTP4A1Q93096 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTP4A1Q93096 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTP4A1Q93096 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.79■□□□□ 0.28
PTP4A1Q93096 KRT16P5-201ENST00000455284 522 ntBASIC16.79■□□□□ 0.28
PTP4A1Q93096 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms