Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ALMS1Q8TCU4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ALMS1Q8TCU4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ALMS1Q8TCU4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
ALMS1Q8TCU4 AC104390.1-201ENST00000555663 520 ntBASIC12.6□□□□□ -0.39
ALMS1Q8TCU4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
ALMS1Q8TCU4 MIR3197-201ENST00000582241 73 ntBASIC12.6□□□□□ -0.39
ALMS1Q8TCU4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.6□□□□□ -0.39
ALMS1Q8TCU4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ALMS1Q8TCU4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ALMS1Q8TCU4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ALMS1Q8TCU4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC12.6□□□□□ -0.39
ALMS1Q8TCU4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ALMS1Q8TCU4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC12.6□□□□□ -0.39
ALMS1Q8TCU4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 AL109659.2-201ENST00000606809 1674 ntBASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 AC009533.2-201ENST00000543664 586 ntBASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 DDT-206ENST00000430101 573 ntTSL 2 BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 LBH-203ENST00000404397 543 ntTSL 4 BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.59□□□□□ -0.39
ALMS1Q8TCU4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
ALMS1Q8TCU4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 AC112482.1-201ENST00000492080 688 ntBASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 FAM8A3P-201ENST00000427218 844 ntBASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 RBM17P3-201ENST00000417687 1192 ntBASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALMS1Q8TCU4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC12.57□□□□□ -0.4
ALMS1Q8TCU4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
ALMS1Q8TCU4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
ALMS1Q8TCU4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ALMS1Q8TCU4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
ALMS1Q8TCU4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ALMS1Q8TCU4 AL353692.3-201ENST00000407031 1396 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms