Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RAB3IL1Q8TBN0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IL1Q8TBN0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IL1Q8TBN0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IL1Q8TBN0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IL1Q8TBN0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IL1Q8TBN0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IL1Q8TBN0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IL1Q8TBN0 FER1L4-210ENST00000615531 5998 ntBASIC18.66■□□□□ 0.58
RAB3IL1Q8TBN0 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
RAB3IL1Q8TBN0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
RAB3IL1Q8TBN0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IL1Q8TBN0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.66■□□□□ 0.58
RAB3IL1Q8TBN0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IL1Q8TBN0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RAB3IL1Q8TBN0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.66■□□□□ 0.58
RAB3IL1Q8TBN0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.66■□□□□ 0.58
RAB3IL1Q8TBN0 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB3IL1Q8TBN0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB3IL1Q8TBN0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RAB3IL1Q8TBN0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IL1Q8TBN0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IL1Q8TBN0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IL1Q8TBN0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IL1Q8TBN0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IL1Q8TBN0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IL1Q8TBN0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RAB3IL1Q8TBN0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3IL1Q8TBN0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 ID1-201ENST00000376105 1233 ntBASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 AC067852.2-201ENST00000590513 2313 ntBASIC18.65■□□□□ 0.58
RAB3IL1Q8TBN0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.64■□□□□ 0.58
RAB3IL1Q8TBN0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RAB3IL1Q8TBN0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RAB3IL1Q8TBN0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RAB3IL1Q8TBN0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3IL1Q8TBN0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.64■□□□□ 0.57
RAB3IL1Q8TBN0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3IL1Q8TBN0 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.64■□□□□ 0.57
RAB3IL1Q8TBN0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.64■□□□□ 0.57
RAB3IL1Q8TBN0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3IL1Q8TBN0 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms