Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.5■□□□□ 0.23
DNAAF1Q8NEP3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
DNAAF1Q8NEP3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
DNAAF1Q8NEP3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
DNAAF1Q8NEP3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
DNAAF1Q8NEP3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
DNAAF1Q8NEP3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
DNAAF1Q8NEP3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
DNAAF1Q8NEP3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
DNAAF1Q8NEP3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
DNAAF1Q8NEP3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
DNAAF1Q8NEP3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
DNAAF1Q8NEP3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.49■□□□□ 0.23
DNAAF1Q8NEP3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DNAAF1Q8NEP3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DNAAF1Q8NEP3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.49■□□□□ 0.23
DNAAF1Q8NEP3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DNAAF1Q8NEP3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
DNAAF1Q8NEP3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.49■□□□□ 0.23
DNAAF1Q8NEP3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.49■□□□□ 0.23
DNAAF1Q8NEP3 POM121L13P-201ENST00000422362 380 ntBASIC16.49■□□□□ 0.23
DNAAF1Q8NEP3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
DNAAF1Q8NEP3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.49■□□□□ 0.23
DNAAF1Q8NEP3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.49■□□□□ 0.23
DNAAF1Q8NEP3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DNAAF1Q8NEP3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
DNAAF1Q8NEP3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
DNAAF1Q8NEP3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
DNAAF1Q8NEP3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.49■□□□□ 0.23
DNAAF1Q8NEP3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DNAAF1Q8NEP3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DNAAF1Q8NEP3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.49■□□□□ 0.23
DNAAF1Q8NEP3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
DNAAF1Q8NEP3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
DNAAF1Q8NEP3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 PRKY-204ENST00000533551 1019 ntBASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
DNAAF1Q8NEP3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 ABALON-201ENST00000629058 1903 ntBASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 UNC93B5-201ENST00000530315 699 ntBASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms