Protein–RNA interactions for Protein: Q8N9S9

SNX31, Sorting nexin-31, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX31Q8N9S9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX31Q8N9S9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX31Q8N9S9 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNX31Q8N9S9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX31Q8N9S9 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 AC090164.3-201ENST00000610780 2143 ntBASIC18.47■□□□□ 0.55
SNX31Q8N9S9 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 PRORSD1P-201ENST00000295112 541 ntBASIC18.47■□□□□ 0.55
SNX31Q8N9S9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 AL353708.3-201ENST00000610272 989 ntBASIC18.47■□□□□ 0.55
SNX31Q8N9S9 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 AC135050.7-201ENST00000624508 2218 ntBASIC18.47■□□□□ 0.55
SNX31Q8N9S9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 KRT16P1-201ENST00000399124 1418 ntBASIC18.47■□□□□ 0.55
SNX31Q8N9S9 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNX31Q8N9S9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 AC142381.4-202ENST00000563973 229 ntBASIC18.46■□□□□ 0.55
SNX31Q8N9S9 AF186192.3-201ENST00000583427 947 ntBASIC18.46■□□□□ 0.55
SNX31Q8N9S9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SNX31Q8N9S9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
SNX31Q8N9S9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
SNX31Q8N9S9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.45■□□□□ 0.54
SNX31Q8N9S9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNX31Q8N9S9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNX31Q8N9S9 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SNX31Q8N9S9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.45■□□□□ 0.54
SNX31Q8N9S9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SNX31Q8N9S9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNX31Q8N9S9 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNX31Q8N9S9 AL158047.1-201ENST00000445918 881 ntBASIC18.45■□□□□ 0.54
SNX31Q8N9S9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.45■□□□□ 0.54
SNX31Q8N9S9 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.45■□□□□ 0.54
SNX31Q8N9S9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.45■□□□□ 0.54
SNX31Q8N9S9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.45■□□□□ 0.54
SNX31Q8N9S9 RARRES2P10-201ENST00000564312 460 ntBASIC18.45■□□□□ 0.54
SNX31Q8N9S9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.45■□□□□ 0.54
SNX31Q8N9S9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.45■□□□□ 0.54
SNX31Q8N9S9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.45■□□□□ 0.54
SNX31Q8N9S9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNX31Q8N9S9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SNX31Q8N9S9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SNX31Q8N9S9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNX31Q8N9S9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms