Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TTC9CQ8N5M4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TTC9CQ8N5M4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TTC9CQ8N5M4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TTC9CQ8N5M4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TTC9CQ8N5M4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TTC9CQ8N5M4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.81□□□□□ -0.04
TTC9CQ8N5M4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.81□□□□□ -0.04
TTC9CQ8N5M4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TTC9CQ8N5M4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TTC9CQ8N5M4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.81□□□□□ -0.04
TTC9CQ8N5M4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
TTC9CQ8N5M4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TTC9CQ8N5M4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.81□□□□□ -0.04
TTC9CQ8N5M4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TTC9CQ8N5M4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TTC9CQ8N5M4 ANO7L1-203ENST00000602586 1720 ntBASIC14.8□□□□□ -0.04
TTC9CQ8N5M4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC9CQ8N5M4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TTC9CQ8N5M4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
TTC9CQ8N5M4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TTC9CQ8N5M4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TTC9CQ8N5M4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.8□□□□□ -0.04
TTC9CQ8N5M4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC9CQ8N5M4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC9CQ8N5M4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.8□□□□□ -0.04
TTC9CQ8N5M4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TTC9CQ8N5M4 CA15P1-201ENST00000481698 905 ntBASIC14.8□□□□□ -0.04
TTC9CQ8N5M4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TTC9CQ8N5M4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TTC9CQ8N5M4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TTC9CQ8N5M4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC9CQ8N5M4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC9CQ8N5M4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.8□□□□□ -0.04
TTC9CQ8N5M4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC9CQ8N5M4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC9CQ8N5M4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.8□□□□□ -0.04
TTC9CQ8N5M4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC14.8□□□□□ -0.04
TTC9CQ8N5M4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC9CQ8N5M4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 UNC93B2-201ENST00000285383 730 ntBASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 CRYGFP-201ENST00000418459 633 ntBASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 AP005242.2-201ENST00000580065 1175 ntBASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TTC9CQ8N5M4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TTC9CQ8N5M4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TTC9CQ8N5M4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TTC9CQ8N5M4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TTC9CQ8N5M4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.78□□□□□ -0.04
TTC9CQ8N5M4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TTC9CQ8N5M4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
TTC9CQ8N5M4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
TTC9CQ8N5M4 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.78□□□□□ -0.04
TTC9CQ8N5M4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TTC9CQ8N5M4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TTC9CQ8N5M4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TTC9CQ8N5M4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TTC9CQ8N5M4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TTC9CQ8N5M4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.78□□□□□ -0.04
TTC9CQ8N5M4 KRT17P2-201ENST00000300992 1314 ntBASIC14.78□□□□□ -0.04
TTC9CQ8N5M4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TTC9CQ8N5M4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.78□□□□□ -0.04
TTC9CQ8N5M4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TTC9CQ8N5M4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.78□□□□□ -0.04
TTC9CQ8N5M4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.78□□□□□ -0.04
TTC9CQ8N5M4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.78□□□□□ -0.04
TTC9CQ8N5M4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.78□□□□□ -0.04
TTC9CQ8N5M4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TTC9CQ8N5M4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TTC9CQ8N5M4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TTC9CQ8N5M4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TTC9CQ8N5M4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TTC9CQ8N5M4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms