Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATPAF2Q8N5M1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATPAF2Q8N5M1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ATPAF2Q8N5M1 AC128688.1-201ENST00000487626 519 ntBASIC19.18■□□□□ 0.66
ATPAF2Q8N5M1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.18■□□□□ 0.66
ATPAF2Q8N5M1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.18■□□□□ 0.66
ATPAF2Q8N5M1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATPAF2Q8N5M1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATPAF2Q8N5M1 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATPAF2Q8N5M1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATPAF2Q8N5M1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
ATPAF2Q8N5M1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATPAF2Q8N5M1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ATPAF2Q8N5M1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATPAF2Q8N5M1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATPAF2Q8N5M1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ATPAF2Q8N5M1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ATPAF2Q8N5M1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.17■□□□□ 0.66
ATPAF2Q8N5M1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ATPAF2Q8N5M1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.17■□□□□ 0.66
ATPAF2Q8N5M1 AL020996.1-203ENST00000536896 2307 ntBASIC19.17■□□□□ 0.66
ATPAF2Q8N5M1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
ATPAF2Q8N5M1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATPAF2Q8N5M1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.17■□□□□ 0.66
ATPAF2Q8N5M1 AC007663.1-201ENST00000438948 1240 ntBASIC19.17■□□□□ 0.66
ATPAF2Q8N5M1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.17■□□□□ 0.66
ATPAF2Q8N5M1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.17■□□□□ 0.66
ATPAF2Q8N5M1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.17■□□□□ 0.66
ATPAF2Q8N5M1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATPAF2Q8N5M1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATPAF2Q8N5M1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATPAF2Q8N5M1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATPAF2Q8N5M1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.17■□□□□ 0.66
ATPAF2Q8N5M1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ATPAF2Q8N5M1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATPAF2Q8N5M1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.17■□□□□ 0.66
ATPAF2Q8N5M1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATPAF2Q8N5M1 AL357033.4-201ENST00000617703 1807 ntBASIC19.16■□□□□ 0.66
ATPAF2Q8N5M1 AL138781.2-201ENST00000617896 1843 ntBASIC19.16■□□□□ 0.66
ATPAF2Q8N5M1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
ATPAF2Q8N5M1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATPAF2Q8N5M1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATPAF2Q8N5M1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ATPAF2Q8N5M1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATPAF2Q8N5M1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATPAF2Q8N5M1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATPAF2Q8N5M1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.16■□□□□ 0.66
ATPAF2Q8N5M1 AC087499.1-201ENST00000418141 1075 ntBASIC19.16■□□□□ 0.66
ATPAF2Q8N5M1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATPAF2Q8N5M1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.16■□□□□ 0.66
ATPAF2Q8N5M1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.16■□□□□ 0.66
ATPAF2Q8N5M1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATPAF2Q8N5M1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.16■□□□□ 0.66
ATPAF2Q8N5M1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATPAF2Q8N5M1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.16■□□□□ 0.66
ATPAF2Q8N5M1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATPAF2Q8N5M1 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATPAF2Q8N5M1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATPAF2Q8N5M1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATPAF2Q8N5M1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ATPAF2Q8N5M1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.15■□□□□ 0.66
ATPAF2Q8N5M1 AC036111.1-201ENST00000533973 1582 ntBASIC19.15■□□□□ 0.66
ATPAF2Q8N5M1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
ATPAF2Q8N5M1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATPAF2Q8N5M1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATPAF2Q8N5M1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
ATPAF2Q8N5M1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.15■□□□□ 0.66
ATPAF2Q8N5M1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.15■□□□□ 0.66
ATPAF2Q8N5M1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ATPAF2Q8N5M1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATPAF2Q8N5M1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.15■□□□□ 0.66
ATPAF2Q8N5M1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ATPAF2Q8N5M1 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.15■□□□□ 0.66
ATPAF2Q8N5M1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.15■□□□□ 0.66
ATPAF2Q8N5M1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATPAF2Q8N5M1 MIR3180-5-201ENST00000583743 153 ntBASIC19.15■□□□□ 0.66
ATPAF2Q8N5M1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ATPAF2Q8N5M1 AC010653.2-201ENST00000623505 997 ntBASIC19.15■□□□□ 0.66
ATPAF2Q8N5M1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.15■□□□□ 0.66
ATPAF2Q8N5M1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATPAF2Q8N5M1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ATPAF2Q8N5M1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
ATPAF2Q8N5M1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ATPAF2Q8N5M1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ATPAF2Q8N5M1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATPAF2Q8N5M1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATPAF2Q8N5M1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.14■□□□□ 0.65
ATPAF2Q8N5M1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.14■□□□□ 0.65
ATPAF2Q8N5M1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
ATPAF2Q8N5M1 INGX-201ENST00000359239 846 ntBASIC19.14■□□□□ 0.65
ATPAF2Q8N5M1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.14■□□□□ 0.65
ATPAF2Q8N5M1 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.14■□□□□ 0.65
ATPAF2Q8N5M1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.14■□□□□ 0.65
ATPAF2Q8N5M1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATPAF2Q8N5M1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ATPAF2Q8N5M1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATPAF2Q8N5M1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.14■□□□□ 0.65
ATPAF2Q8N5M1 LINC01568-207ENST00000641790 1380 ntBASIC19.14■□□□□ 0.65
ATPAF2Q8N5M1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATPAF2Q8N5M1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms