Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
COL27A1Q8IZC6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL27A1Q8IZC6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 AC148477.8-201ENST00000624298 468 ntBASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.61■□□□□ 0.41
COL27A1Q8IZC6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 LINC01521-201ENST00000504184 1943 ntBASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 MIR574-201ENST00000385209 96 ntBASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 VENTXP7-201ENST00000475503 772 ntBASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 GUSBP12-201ENST00000513727 720 ntBASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 AC006538.3-201ENST00000612495 578 ntBASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL27A1Q8IZC6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.59■□□□□ 0.41
COL27A1Q8IZC6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.59■□□□□ 0.41
COL27A1Q8IZC6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.59■□□□□ 0.41
COL27A1Q8IZC6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL27A1Q8IZC6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
COL27A1Q8IZC6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.59■□□□□ 0.41
COL27A1Q8IZC6 AC113404.2-201ENST00000507884 177 ntBASIC17.59■□□□□ 0.41
COL27A1Q8IZC6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
COL27A1Q8IZC6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.59■□□□□ 0.41
COL27A1Q8IZC6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.59■□□□□ 0.41
COL27A1Q8IZC6 AC008608.2-201ENST00000606089 416 ntBASIC17.59■□□□□ 0.41
COL27A1Q8IZC6 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
COL27A1Q8IZC6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.59■□□□□ 0.41
COL27A1Q8IZC6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
COL27A1Q8IZC6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.59■□□□□ 0.41
COL27A1Q8IZC6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
COL27A1Q8IZC6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL27A1Q8IZC6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
COL27A1Q8IZC6 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.58■□□□□ 0.41
COL27A1Q8IZC6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL27A1Q8IZC6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.58■□□□□ 0.41
COL27A1Q8IZC6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL27A1Q8IZC6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.58■□□□□ 0.41
COL27A1Q8IZC6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.58■□□□□ 0.41
COL27A1Q8IZC6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL27A1Q8IZC6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
COL27A1Q8IZC6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
COL27A1Q8IZC6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
COL27A1Q8IZC6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL27A1Q8IZC6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms