Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 RNF152P1-201ENST00000397754 604 ntBASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 AC140113.3-201ENST00000605663 199 ntBASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf40Q8IXQ3 AC120498.9-201ENST00000339021 3867 ntBASIC17.25■□□□□ 0.35
C9orf40Q8IXQ3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf40Q8IXQ3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
C9orf40Q8IXQ3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf40Q8IXQ3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
C9orf40Q8IXQ3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf40Q8IXQ3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf40Q8IXQ3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf40Q8IXQ3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf40Q8IXQ3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf40Q8IXQ3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf40Q8IXQ3 HOXB1-202ENST00000577092 1414 ntBASIC17.25■□□□□ 0.35
C9orf40Q8IXQ3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.25■□□□□ 0.35
C9orf40Q8IXQ3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf40Q8IXQ3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.25■□□□□ 0.35
C9orf40Q8IXQ3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.25■□□□□ 0.35
C9orf40Q8IXQ3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.25■□□□□ 0.35
C9orf40Q8IXQ3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.25■□□□□ 0.35
C9orf40Q8IXQ3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf40Q8IXQ3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.25■□□□□ 0.35
C9orf40Q8IXQ3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
C9orf40Q8IXQ3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf40Q8IXQ3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 KRT8P7-201ENST00000533003 1432 ntBASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 TSPY5P-201ENST00000426936 936 ntBASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 SEC1P-202ENST00000473944 940 ntBASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 AL049597.2-201ENST00000565575 961 ntBASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 AL031598.1-201ENST00000561511 1773 ntBASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 AIRN-201ENST00000601203 4374 ntBASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 ANO7L1-203ENST00000602586 1720 ntBASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.24■□□□□ 0.35
C9orf40Q8IXQ3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 TNXA-203ENST00000507684 2038 ntBASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf40Q8IXQ3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms