Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.5■□□□□ 0.71
RFWD3Q6PCD5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 AC139887.4-201ENST00000607877 719 ntBASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 FP475955.4-201ENST00000623131 1990 ntBASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 KRT8P3-201ENST00000519669 1449 ntBASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
RFWD3Q6PCD5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RFWD3Q6PCD5 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFWD3Q6PCD5 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.48■□□□□ 0.71
RFWD3Q6PCD5 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFWD3Q6PCD5 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFWD3Q6PCD5 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFWD3Q6PCD5 AC117947.1-201ENST00000427448 529 ntBASIC19.48■□□□□ 0.71
RFWD3Q6PCD5 BX664615.1-201ENST00000443558 458 ntBASIC19.48■□□□□ 0.71
RFWD3Q6PCD5 DUX4L26-201ENST00000489078 1255 ntBASIC19.48■□□□□ 0.71
RFWD3Q6PCD5 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
RFWD3Q6PCD5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.48■□□□□ 0.71
RFWD3Q6PCD5 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
RFWD3Q6PCD5 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RFWD3Q6PCD5 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.48■□□□□ 0.71
RFWD3Q6PCD5 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFWD3Q6PCD5 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFWD3Q6PCD5 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFWD3Q6PCD5 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.48■□□□□ 0.71
RFWD3Q6PCD5 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFWD3Q6PCD5 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFWD3Q6PCD5 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 AL023284.2-201ENST00000405850 579 ntBASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.47■□□□□ 0.71
RFWD3Q6PCD5 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms