Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.06■□□□□ 0.32
NIPAL3Q6P499 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NIPAL3Q6P499 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NIPAL3Q6P499 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NIPAL3Q6P499 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.05■□□□□ 0.32
NIPAL3Q6P499 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.05■□□□□ 0.32
NIPAL3Q6P499 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.05■□□□□ 0.32
NIPAL3Q6P499 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NIPAL3Q6P499 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NIPAL3Q6P499 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NIPAL3Q6P499 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.05■□□□□ 0.32
NIPAL3Q6P499 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NIPAL3Q6P499 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.05■□□□□ 0.32
NIPAL3Q6P499 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NIPAL3Q6P499 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.05■□□□□ 0.32
NIPAL3Q6P499 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NIPAL3Q6P499 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.05■□□□□ 0.32
NIPAL3Q6P499 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NIPAL3Q6P499 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NIPAL3Q6P499 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NIPAL3Q6P499 Z85996.1-201ENST00000494644 937 ntBASIC17.05■□□□□ 0.32
NIPAL3Q6P499 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.05■□□□□ 0.32
NIPAL3Q6P499 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.05■□□□□ 0.32
NIPAL3Q6P499 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.05■□□□□ 0.32
NIPAL3Q6P499 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.05■□□□□ 0.32
NIPAL3Q6P499 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NIPAL3Q6P499 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NIPAL3Q6P499 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NIPAL3Q6P499 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NIPAL3Q6P499 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NIPAL3Q6P499 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NIPAL3Q6P499 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NIPAL3Q6P499 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
NIPAL3Q6P499 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
NIPAL3Q6P499 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NIPAL3Q6P499 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NIPAL3Q6P499 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NIPAL3Q6P499 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.03■□□□□ 0.32
NIPAL3Q6P499 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NIPAL3Q6P499 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.03■□□□□ 0.32
NIPAL3Q6P499 AC026271.3-201ENST00000571884 352 ntBASIC17.03■□□□□ 0.32
NIPAL3Q6P499 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
NIPAL3Q6P499 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.03■□□□□ 0.32
NIPAL3Q6P499 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.03■□□□□ 0.32
NIPAL3Q6P499 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NIPAL3Q6P499 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NIPAL3Q6P499 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.03■□□□□ 0.32
NIPAL3Q6P499 AL133373.2-201ENST00000623187 2828 ntBASIC17.03■□□□□ 0.32
NIPAL3Q6P499 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.03■□□□□ 0.32
NIPAL3Q6P499 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms