Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRNP1Q6NT89 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRNP1Q6NT89 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRNP1Q6NT89 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRNP1Q6NT89 KRT18P41-201ENST00000518924 1277 ntBASIC19.47■□□□□ 0.71
TRNP1Q6NT89 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.47■□□□□ 0.71
TRNP1Q6NT89 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRNP1Q6NT89 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRNP1Q6NT89 KRT8P50-201ENST00000562022 1438 ntBASIC19.47■□□□□ 0.71
TRNP1Q6NT89 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TRNP1Q6NT89 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRNP1Q6NT89 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.47■□□□□ 0.71
TRNP1Q6NT89 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRNP1Q6NT89 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRNP1Q6NT89 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TRNP1Q6NT89 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TRNP1Q6NT89 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRNP1Q6NT89 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 AC099343.3-201ENST00000605834 2503 ntBASIC19.46■□□□□ 0.71
TRNP1Q6NT89 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 AC010203.1-204ENST00000548782 407 ntBASIC19.46■□□□□ 0.71
TRNP1Q6NT89 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 KRT18P22-201ENST00000402024 1347 ntBASIC19.46■□□□□ 0.71
TRNP1Q6NT89 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRNP1Q6NT89 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TRNP1Q6NT89 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.45■□□□□ 0.7
TRNP1Q6NT89 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRNP1Q6NT89 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.45■□□□□ 0.7
TRNP1Q6NT89 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.45■□□□□ 0.7
TRNP1Q6NT89 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRNP1Q6NT89 AC034236.2-201ENST00000606662 1610 ntBASIC19.45■□□□□ 0.7
TRNP1Q6NT89 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRNP1Q6NT89 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRNP1Q6NT89 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRNP1Q6NT89 HMGA1P5-201ENST00000412453 271 ntBASIC19.45■□□□□ 0.7
TRNP1Q6NT89 AC211429.1-201ENST00000415277 523 ntBASIC19.45■□□□□ 0.7
TRNP1Q6NT89 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.45■□□□□ 0.7
TRNP1Q6NT89 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.45■□□□□ 0.7
TRNP1Q6NT89 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.45■□□□□ 0.7
TRNP1Q6NT89 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.45■□□□□ 0.7
TRNP1Q6NT89 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
TRNP1Q6NT89 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRNP1Q6NT89 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TRNP1Q6NT89 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.45■□□□□ 0.7
TRNP1Q6NT89 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRNP1Q6NT89 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRNP1Q6NT89 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRNP1Q6NT89 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRNP1Q6NT89 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRNP1Q6NT89 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TRNP1Q6NT89 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.45■□□□□ 0.7
TRNP1Q6NT89 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRNP1Q6NT89 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRNP1Q6NT89 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRNP1Q6NT89 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRNP1Q6NT89 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.44■□□□□ 0.7
TRNP1Q6NT89 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRNP1Q6NT89 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRNP1Q6NT89 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRNP1Q6NT89 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRNP1Q6NT89 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRNP1Q6NT89 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRNP1Q6NT89 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRNP1Q6NT89 SLC25A3P1-201ENST00000443844 931 ntBASIC19.44■□□□□ 0.7
TRNP1Q6NT89 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.44■□□□□ 0.7
TRNP1Q6NT89 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
TRNP1Q6NT89 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRNP1Q6NT89 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.44■□□□□ 0.7
TRNP1Q6NT89 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
TRNP1Q6NT89 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRNP1Q6NT89 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRNP1Q6NT89 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRNP1Q6NT89 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.44■□□□□ 0.7
TRNP1Q6NT89 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.44■□□□□ 0.7
TRNP1Q6NT89 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms