Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.25■□□□□ 0.99
PPP4R3AQ6IN85 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PPP4R3AQ6IN85 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PPP4R3AQ6IN85 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PPP4R3AQ6IN85 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.25■□□□□ 0.99
PPP4R3AQ6IN85 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PPP4R3AQ6IN85 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PPP4R3AQ6IN85 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PPP4R3AQ6IN85 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PPP4R3AQ6IN85 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PPP4R3AQ6IN85 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PPP4R3AQ6IN85 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.25■□□□□ 0.99
PPP4R3AQ6IN85 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.25■□□□□ 0.99
PPP4R3AQ6IN85 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PPP4R3AQ6IN85 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.25■□□□□ 0.99
PPP4R3AQ6IN85 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.25■□□□□ 0.99
PPP4R3AQ6IN85 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PPP4R3AQ6IN85 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
PPP4R3AQ6IN85 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.25■□□□□ 0.99
PPP4R3AQ6IN85 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PPP4R3AQ6IN85 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PPP4R3AQ6IN85 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
PPP4R3AQ6IN85 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PPP4R3AQ6IN85 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
PPP4R3AQ6IN85 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PPP4R3AQ6IN85 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PPP4R3AQ6IN85 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.24■□□□□ 0.99
PPP4R3AQ6IN85 TNXA-203ENST00000507684 2038 ntBASIC21.24■□□□□ 0.99
PPP4R3AQ6IN85 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PPP4R3AQ6IN85 AC073508.3-201ENST00000619697 1419 ntBASIC21.24■□□□□ 0.99
PPP4R3AQ6IN85 AL031598.1-201ENST00000561511 1773 ntBASIC21.24■□□□□ 0.99
PPP4R3AQ6IN85 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PPP4R3AQ6IN85 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PPP4R3AQ6IN85 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
PPP4R3AQ6IN85 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.24■□□□□ 0.99
PPP4R3AQ6IN85 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PPP4R3AQ6IN85 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.24■□□□□ 0.99
PPP4R3AQ6IN85 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.24■□□□□ 0.99
PPP4R3AQ6IN85 AL138966.2-201ENST00000621997 464 ntBASIC21.24■□□□□ 0.99
PPP4R3AQ6IN85 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PPP4R3AQ6IN85 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PPP4R3AQ6IN85 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.24■□□□□ 0.99
PPP4R3AQ6IN85 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PPP4R3AQ6IN85 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PPP4R3AQ6IN85 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PPP4R3AQ6IN85 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.24■□□□□ 0.99
PPP4R3AQ6IN85 AL357033.4-201ENST00000617703 1807 ntBASIC21.24■□□□□ 0.99
PPP4R3AQ6IN85 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PPP4R3AQ6IN85 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PPP4R3AQ6IN85 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PPP4R3AQ6IN85 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.23■□□□□ 0.99
PPP4R3AQ6IN85 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PPP4R3AQ6IN85 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PPP4R3AQ6IN85 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PPP4R3AQ6IN85 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
PPP4R3AQ6IN85 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.23■□□□□ 0.99
PPP4R3AQ6IN85 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PPP4R3AQ6IN85 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PPP4R3AQ6IN85 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PPP4R3AQ6IN85 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PPP4R3AQ6IN85 AC010203.1-204ENST00000548782 407 ntBASIC21.23■□□□□ 0.99
PPP4R3AQ6IN85 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.23■□□□□ 0.99
PPP4R3AQ6IN85 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
PPP4R3AQ6IN85 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PPP4R3AQ6IN85 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
PPP4R3AQ6IN85 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PPP4R3AQ6IN85 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PPP4R3AQ6IN85 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PPP4R3AQ6IN85 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PPP4R3AQ6IN85 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.23■□□□□ 0.99
PPP4R3AQ6IN85 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PPP4R3AQ6IN85 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PPP4R3AQ6IN85 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PPP4R3AQ6IN85 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PPP4R3AQ6IN85 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PPP4R3AQ6IN85 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
PPP4R3AQ6IN85 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PPP4R3AQ6IN85 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PPP4R3AQ6IN85 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PPP4R3AQ6IN85 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PPP4R3AQ6IN85 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PPP4R3AQ6IN85 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.22■□□□□ 0.99
PPP4R3AQ6IN85 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PPP4R3AQ6IN85 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PPP4R3AQ6IN85 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
PPP4R3AQ6IN85 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PPP4R3AQ6IN85 TERF1P1-201ENST00000311003 1181 ntBASIC21.22■□□□□ 0.99
PPP4R3AQ6IN85 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PPP4R3AQ6IN85 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PPP4R3AQ6IN85 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
PPP4R3AQ6IN85 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PPP4R3AQ6IN85 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PPP4R3AQ6IN85 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.22■□□□□ 0.99
PPP4R3AQ6IN85 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PPP4R3AQ6IN85 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PPP4R3AQ6IN85 AC036111.1-201ENST00000533973 1582 ntBASIC21.22■□□□□ 0.99
PPP4R3AQ6IN85 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PPP4R3AQ6IN85 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.21■□□□□ 0.99
PPP4R3AQ6IN85 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PPP4R3AQ6IN85 Z98044.1-201ENST00000632503 1764 ntBASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms