Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF220Q5VTB9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF220Q5VTB9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF220Q5VTB9 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF220Q5VTB9 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RNF220Q5VTB9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RNF220Q5VTB9 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RNF220Q5VTB9 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF220Q5VTB9 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF220Q5VTB9 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.03■□□□□ 0.48
RNF220Q5VTB9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
RNF220Q5VTB9 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF220Q5VTB9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.03■□□□□ 0.48
RNF220Q5VTB9 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.03■□□□□ 0.48
RNF220Q5VTB9 AC006557.6-201ENST00000623071 864 ntBASIC18.03■□□□□ 0.48
RNF220Q5VTB9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF220Q5VTB9 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF220Q5VTB9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF220Q5VTB9 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF220Q5VTB9 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RNF220Q5VTB9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF220Q5VTB9 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF220Q5VTB9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RNF220Q5VTB9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF220Q5VTB9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.02■□□□□ 0.48
RNF220Q5VTB9 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF220Q5VTB9 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF220Q5VTB9 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF220Q5VTB9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.02■□□□□ 0.48
RNF220Q5VTB9 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RNF220Q5VTB9 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.02■□□□□ 0.48
RNF220Q5VTB9 AC098934.4-201ENST00000564127 592 ntBASIC18.02■□□□□ 0.48
RNF220Q5VTB9 AL138781.1-201ENST00000566567 1274 ntBASIC18.02■□□□□ 0.48
RNF220Q5VTB9 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF220Q5VTB9 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF220Q5VTB9 AC083880.1-201ENST00000608266 535 ntBASIC18.02■□□□□ 0.48
RNF220Q5VTB9 AC092666.2-201ENST00000613287 246 ntBASIC18.02■□□□□ 0.48
RNF220Q5VTB9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF220Q5VTB9 AL109923.1-201ENST00000618799 583 ntBASIC18.02■□□□□ 0.48
RNF220Q5VTB9 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF220Q5VTB9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.02■□□□□ 0.47
RNF220Q5VTB9 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF220Q5VTB9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
RNF220Q5VTB9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RNF220Q5VTB9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.02■□□□□ 0.47
RNF220Q5VTB9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RNF220Q5VTB9 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.02■□□□□ 0.47
RNF220Q5VTB9 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
RNF220Q5VTB9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 RPS2P52-201ENST00000469610 820 ntBASIC18.01■□□□□ 0.47
RNF220Q5VTB9 PNMA6B-201ENST00000538162 1200 ntBASIC18.01■□□□□ 0.47
RNF220Q5VTB9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 AL121906.2-201ENST00000621597 723 ntBASIC18.01■□□□□ 0.47
RNF220Q5VTB9 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
RNF220Q5VTB9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF220Q5VTB9 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF220Q5VTB9 AC135776.1-201ENST00000319817 2481 ntBASIC18■□□□□ 0.47
RNF220Q5VTB9 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF220Q5VTB9 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18■□□□□ 0.47
RNF220Q5VTB9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18■□□□□ 0.47
RNF220Q5VTB9 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
RNF220Q5VTB9 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
RNF220Q5VTB9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF220Q5VTB9 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RNF220Q5VTB9 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF220Q5VTB9 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF220Q5VTB9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RNF220Q5VTB9 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF220Q5VTB9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF220Q5VTB9 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF220Q5VTB9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RNF220Q5VTB9 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18■□□□□ 0.47
RNF220Q5VTB9 ABHD17AP6-201ENST00000458502 1044 ntBASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms