Protein–RNA interactions for Protein: Q12805

EFEMP1, EGF-containing fibulin-like extracellular matrix protein 1, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1Q12805 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EFEMP1Q12805 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EFEMP1Q12805 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
EFEMP1Q12805 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
EFEMP1Q12805 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EFEMP1Q12805 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EFEMP1Q12805 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFEMP1Q12805 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFEMP1Q12805 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFEMP1Q12805 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.45■□□□□ 0.7
EFEMP1Q12805 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFEMP1Q12805 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.45■□□□□ 0.7
EFEMP1Q12805 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFEMP1Q12805 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFEMP1Q12805 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.45■□□□□ 0.7
EFEMP1Q12805 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.45■□□□□ 0.7
EFEMP1Q12805 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.45■□□□□ 0.7
EFEMP1Q12805 KRT18P23-201ENST00000435622 1283 ntBASIC19.45■□□□□ 0.7
EFEMP1Q12805 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFEMP1Q12805 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.45■□□□□ 0.7
EFEMP1Q12805 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EFEMP1Q12805 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFEMP1Q12805 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFEMP1Q12805 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EFEMP1Q12805 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFEMP1Q12805 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
EFEMP1Q12805 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFEMP1Q12805 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
EFEMP1Q12805 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EFEMP1Q12805 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.45■□□□□ 0.7
EFEMP1Q12805 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFEMP1Q12805 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
EFEMP1Q12805 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EFEMP1Q12805 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EFEMP1Q12805 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.44■□□□□ 0.7
EFEMP1Q12805 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.44■□□□□ 0.7
EFEMP1Q12805 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EFEMP1Q12805 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
EFEMP1Q12805 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EFEMP1Q12805 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EFEMP1Q12805 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
EFEMP1Q12805 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
EFEMP1Q12805 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.44■□□□□ 0.7
EFEMP1Q12805 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.44■□□□□ 0.7
EFEMP1Q12805 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
EFEMP1Q12805 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.44■□□□□ 0.7
EFEMP1Q12805 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.44■□□□□ 0.7
EFEMP1Q12805 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.44■□□□□ 0.7
EFEMP1Q12805 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.44■□□□□ 0.7
EFEMP1Q12805 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EFEMP1Q12805 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.44■□□□□ 0.7
EFEMP1Q12805 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.44■□□□□ 0.7
EFEMP1Q12805 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.44■□□□□ 0.7
EFEMP1Q12805 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.44■□□□□ 0.7
EFEMP1Q12805 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFEMP1Q12805 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFEMP1Q12805 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EFEMP1Q12805 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.43■□□□□ 0.7
EFEMP1Q12805 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.43■□□□□ 0.7
EFEMP1Q12805 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EFEMP1Q12805 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.43■□□□□ 0.7
EFEMP1Q12805 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.43■□□□□ 0.7
EFEMP1Q12805 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EFEMP1Q12805 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.43■□□□□ 0.7
EFEMP1Q12805 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFEMP1Q12805 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFEMP1Q12805 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EFEMP1Q12805 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFEMP1Q12805 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EFEMP1Q12805 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFEMP1Q12805 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFEMP1Q12805 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.43■□□□□ 0.7
EFEMP1Q12805 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.43■□□□□ 0.7
EFEMP1Q12805 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.43■□□□□ 0.7
EFEMP1Q12805 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
EFEMP1Q12805 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFEMP1Q12805 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.43■□□□□ 0.7
EFEMP1Q12805 MYC-208ENST00000641036 567 ntBASIC19.43■□□□□ 0.7
EFEMP1Q12805 AC083906.6-201ENST00000641366 219 ntBASIC19.43■□□□□ 0.7
EFEMP1Q12805 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.43■□□□□ 0.7
EFEMP1Q12805 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFEMP1Q12805 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFEMP1Q12805 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EFEMP1Q12805 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFEMP1Q12805 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFEMP1Q12805 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.43■□□□□ 0.7
EFEMP1Q12805 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
EFEMP1Q12805 AL357033.4-201ENST00000617703 1807 ntBASIC19.42■□□□□ 0.7
EFEMP1Q12805 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EFEMP1Q12805 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.42■□□□□ 0.7
EFEMP1Q12805 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.42■□□□□ 0.7
EFEMP1Q12805 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EFEMP1Q12805 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EFEMP1Q12805 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
EFEMP1Q12805 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EFEMP1Q12805 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EFEMP1Q12805 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EFEMP1Q12805 SPDYE15P-201ENST00000424157 909 ntBASIC19.42■□□□□ 0.7
EFEMP1Q12805 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EFEMP1Q12805 SEC1P-202ENST00000473944 940 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms