Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.74■□□□□ 0.27
CLRN1P58418 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.74■□□□□ 0.27
CLRN1P58418 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLRN1P58418 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLRN1P58418 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLRN1P58418 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLRN1P58418 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CLRN1P58418 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLRN1P58418 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLRN1P58418 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLRN1P58418 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLRN1P58418 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLRN1P58418 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.74■□□□□ 0.27
CLRN1P58418 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLRN1P58418 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.74■□□□□ 0.27
CLRN1P58418 MFAP1P1-201ENST00000442257 1255 ntBASIC16.74■□□□□ 0.27
CLRN1P58418 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.74■□□□□ 0.27
CLRN1P58418 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.74■□□□□ 0.27
CLRN1P58418 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.74■□□□□ 0.27
CLRN1P58418 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.74■□□□□ 0.27
CLRN1P58418 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.74■□□□□ 0.27
CLRN1P58418 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.74■□□□□ 0.27
CLRN1P58418 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.74■□□□□ 0.27
CLRN1P58418 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.74■□□□□ 0.27
CLRN1P58418 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.74■□□□□ 0.27
CLRN1P58418 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLRN1P58418 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.74■□□□□ 0.27
CLRN1P58418 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLRN1P58418 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLRN1P58418 HEIH-201ENST00000623091 1652 ntBASIC16.74■□□□□ 0.27
CLRN1P58418 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLRN1P58418 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
CLRN1P58418 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLRN1P58418 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.74■□□□□ 0.27
CLRN1P58418 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLRN1P58418 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLRN1P58418 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLRN1P58418 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLRN1P58418 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.73■□□□□ 0.27
CLRN1P58418 ANO7L1-203ENST00000602586 1720 ntBASIC16.73■□□□□ 0.27
CLRN1P58418 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLRN1P58418 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLRN1P58418 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.73■□□□□ 0.27
CLRN1P58418 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
CLRN1P58418 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLRN1P58418 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.73■□□□□ 0.27
CLRN1P58418 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.73■□□□□ 0.27
CLRN1P58418 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLRN1P58418 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.73■□□□□ 0.27
CLRN1P58418 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLRN1P58418 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.73■□□□□ 0.27
CLRN1P58418 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.73■□□□□ 0.27
CLRN1P58418 AP003071.4-201ENST00000562276 1284 ntBASIC16.73■□□□□ 0.27
CLRN1P58418 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.73■□□□□ 0.27
CLRN1P58418 MIR4785-201ENST00000585005 73 ntBASIC16.73■□□□□ 0.27
CLRN1P58418 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLRN1P58418 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLRN1P58418 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLRN1P58418 AC096733.2-201ENST00000609937 1394 ntBASIC16.73■□□□□ 0.27
CLRN1P58418 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CLRN1P58418 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLRN1P58418 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.72■□□□□ 0.27
CLRN1P58418 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLRN1P58418 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.72■□□□□ 0.27
CLRN1P58418 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLRN1P58418 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLRN1P58418 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLRN1P58418 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLRN1P58418 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CLRN1P58418 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.72■□□□□ 0.27
CLRN1P58418 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLRN1P58418 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CLRN1P58418 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CLRN1P58418 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CLRN1P58418 CRYGFP-201ENST00000418459 633 ntBASIC16.72■□□□□ 0.27
CLRN1P58418 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLRN1P58418 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLRN1P58418 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLRN1P58418 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CLRN1P58418 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CLRN1P58418 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLRN1P58418 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CLRN1P58418 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLRN1P58418 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.72■□□□□ 0.27
CLRN1P58418 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLRN1P58418 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.72■□□□□ 0.27
CLRN1P58418 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.72■□□□□ 0.27
CLRN1P58418 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLRN1P58418 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLRN1P58418 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.71■□□□□ 0.27
CLRN1P58418 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.71■□□□□ 0.27
CLRN1P58418 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.71■□□□□ 0.27
CLRN1P58418 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLRN1P58418 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLRN1P58418 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLRN1P58418 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.71■□□□□ 0.27
CLRN1P58418 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
CLRN1P58418 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLRN1P58418 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLRN1P58418 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms