Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
AP1S2P56377 AC008556.1-201ENST00000610908 2040 ntBASIC18.22■□□□□ 0.51
AP1S2P56377 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP1S2P56377 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP1S2P56377 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP1S2P56377 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
AP1S2P56377 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.21■□□□□ 0.51
AP1S2P56377 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
AP1S2P56377 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
AP1S2P56377 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP1S2P56377 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.21■□□□□ 0.51
AP1S2P56377 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP1S2P56377 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.21■□□□□ 0.51
AP1S2P56377 MIR1238-201ENST00000408483 83 ntBASIC18.21■□□□□ 0.51
AP1S2P56377 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.21■□□□□ 0.51
AP1S2P56377 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.21■□□□□ 0.51
AP1S2P56377 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP1S2P56377 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
AP1S2P56377 KRT18P41-201ENST00000518924 1277 ntBASIC18.21■□□□□ 0.51
AP1S2P56377 AL353719.1-201ENST00000566847 864 ntBASIC18.21■□□□□ 0.51
AP1S2P56377 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.21■□□□□ 0.51
AP1S2P56377 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP1S2P56377 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP1S2P56377 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP1S2P56377 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
AP1S2P56377 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
AP1S2P56377 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP1S2P56377 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
AP1S2P56377 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.21■□□□□ 0.51
AP1S2P56377 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP1S2P56377 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
AP1S2P56377 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S2P56377 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
AP1S2P56377 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S2P56377 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S2P56377 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S2P56377 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S2P56377 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.2■□□□□ 0.5
AP1S2P56377 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S2P56377 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S2P56377 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
AP1S2P56377 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
AP1S2P56377 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S2P56377 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
AP1S2P56377 AC093827.2-201ENST00000512654 315 ntBASIC18.2■□□□□ 0.5
AP1S2P56377 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
AP1S2P56377 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.2■□□□□ 0.5
AP1S2P56377 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S2P56377 AC116562.4-202ENST00000641738 218 ntBASIC18.2■□□□□ 0.5
AP1S2P56377 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.2■□□□□ 0.5
AP1S2P56377 AC073592.3-201ENST00000625118 1834 ntBASIC18.2■□□□□ 0.5
AP1S2P56377 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S2P56377 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
AP1S2P56377 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.2■□□□□ 0.5
AP1S2P56377 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S2P56377 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S2P56377 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S2P56377 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.2■□□□□ 0.5
AP1S2P56377 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S2P56377 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S2P56377 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S2P56377 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.2■□□□□ 0.5
AP1S2P56377 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S2P56377 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.19■□□□□ 0.5
AP1S2P56377 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.19■□□□□ 0.5
AP1S2P56377 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S2P56377 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S2P56377 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S2P56377 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.19■□□□□ 0.5
AP1S2P56377 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
AP1S2P56377 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S2P56377 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S2P56377 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.19■□□□□ 0.5
AP1S2P56377 MIR564-202ENST00000385049 94 ntBASIC18.19■□□□□ 0.5
AP1S2P56377 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S2P56377 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S2P56377 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.19■□□□□ 0.5
AP1S2P56377 AL390955.1-201ENST00000428694 934 ntBASIC18.19■□□□□ 0.5
AP1S2P56377 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.19■□□□□ 0.5
AP1S2P56377 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.19■□□□□ 0.5
AP1S2P56377 MIR3180-5-201ENST00000583743 153 ntBASIC18.19■□□□□ 0.5
AP1S2P56377 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S2P56377 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.19■□□□□ 0.5
AP1S2P56377 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
AP1S2P56377 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S2P56377 AC090164.3-201ENST00000610780 2143 ntBASIC18.19■□□□□ 0.5
AP1S2P56377 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S2P56377 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S2P56377 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.19■□□□□ 0.5
AP1S2P56377 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP1S2P56377 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP1S2P56377 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
AP1S2P56377 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP1S2P56377 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
AP1S2P56377 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.18■□□□□ 0.5
AP1S2P56377 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.18■□□□□ 0.5
AP1S2P56377 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
AP1S2P56377 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP1S2P56377 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
AP1S2P56377 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms