Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.46■□□□□ 0.39
CDH15P55291 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.46■□□□□ 0.39
CDH15P55291 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.46■□□□□ 0.39
CDH15P55291 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.46■□□□□ 0.39
CDH15P55291 SDHAP1-207ENST00000440850 2000 ntBASIC17.46■□□□□ 0.39
CDH15P55291 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH15P55291 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.46■□□□□ 0.39
CDH15P55291 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.46■□□□□ 0.39
CDH15P55291 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH15P55291 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.46■□□□□ 0.39
CDH15P55291 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDH15P55291 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
CDH15P55291 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CDH15P55291 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH15P55291 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH15P55291 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CDH15P55291 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CDH15P55291 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH15P55291 CYP21A1P-202ENST00000354927 1481 ntBASIC17.45■□□□□ 0.38
CDH15P55291 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.45■□□□□ 0.38
CDH15P55291 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH15P55291 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH15P55291 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.45■□□□□ 0.38
CDH15P55291 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH15P55291 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.45■□□□□ 0.38
CDH15P55291 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH15P55291 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH15P55291 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH15P55291 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CDH15P55291 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH15P55291 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH15P55291 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH15P55291 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.45■□□□□ 0.38
CDH15P55291 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.45■□□□□ 0.38
CDH15P55291 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH15P55291 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
CDH15P55291 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH15P55291 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH15P55291 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH15P55291 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CDH15P55291 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDH15P55291 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH15P55291 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CDH15P55291 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CDH15P55291 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CDH15P55291 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH15P55291 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
CDH15P55291 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH15P55291 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
CDH15P55291 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH15P55291 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH15P55291 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH15P55291 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH15P55291 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH15P55291 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH15P55291 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH15P55291 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH15P55291 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH15P55291 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH15P55291 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH15P55291 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CDH15P55291 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.44■□□□□ 0.38
CDH15P55291 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.44■□□□□ 0.38
CDH15P55291 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.44■□□□□ 0.38
CDH15P55291 AL162412.1-201ENST00000567129 965 ntBASIC17.44■□□□□ 0.38
CDH15P55291 AC016405.3-201ENST00000607710 860 ntBASIC17.44■□□□□ 0.38
CDH15P55291 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CDH15P55291 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.44■□□□□ 0.38
CDH15P55291 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CDH15P55291 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH15P55291 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CDH15P55291 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CDH15P55291 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH15P55291 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH15P55291 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
CDH15P55291 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH15P55291 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH15P55291 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CDH15P55291 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH15P55291 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH15P55291 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH15P55291 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH15P55291 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH15P55291 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH15P55291 AC141586.5-201ENST00000624546 2050 ntBASIC17.43■□□□□ 0.38
CDH15P55291 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CDH15P55291 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH15P55291 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH15P55291 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CDH15P55291 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH15P55291 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.43■□□□□ 0.38
CDH15P55291 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.43■□□□□ 0.38
CDH15P55291 AC092118.2-201ENST00000613495 667 ntBASIC17.43■□□□□ 0.38
CDH15P55291 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH15P55291 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH15P55291 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH15P55291 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH15P55291 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CDH15P55291 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH15P55291 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms