Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC6A4P31645 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC6A4P31645 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
SLC6A4P31645 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A4P31645 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
SLC6A4P31645 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.22■□□□□ 0.67
SLC6A4P31645 HYMAI.1-201ENST00000620949 238 ntBASIC19.22■□□□□ 0.67
SLC6A4P31645 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC6A4P31645 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A4P31645 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SLC6A4P31645 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A4P31645 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A4P31645 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A4P31645 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A4P31645 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A4P31645 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A4P31645 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A4P31645 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A4P31645 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
SLC6A4P31645 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A4P31645 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A4P31645 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A4P31645 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SLC6A4P31645 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SLC6A4P31645 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC6A4P31645 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SLC6A4P31645 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SLC6A4P31645 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A4P31645 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A4P31645 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC6A4P31645 RASA4DP-201ENST00000460726 1199 ntBASIC19.21■□□□□ 0.67
SLC6A4P31645 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.21■□□□□ 0.67
SLC6A4P31645 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC6A4P31645 HOXB1-202ENST00000577092 1414 ntBASIC19.21■□□□□ 0.67
SLC6A4P31645 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.21■□□□□ 0.67
SLC6A4P31645 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
SLC6A4P31645 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A4P31645 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A4P31645 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC6A4P31645 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A4P31645 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC6A4P31645 AC034236.2-201ENST00000606662 1610 ntBASIC19.21■□□□□ 0.67
SLC6A4P31645 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A4P31645 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A4P31645 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A4P31645 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A4P31645 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A4P31645 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC6A4P31645 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SLC6A4P31645 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A4P31645 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A4P31645 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A4P31645 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A4P31645 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A4P31645 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A4P31645 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A4P31645 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A4P31645 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A4P31645 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SLC6A4P31645 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A4P31645 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A4P31645 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC6A4P31645 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A4P31645 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A4P31645 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A4P31645 AL671277.2-201ENST00000458060 996 ntBASIC19.2■□□□□ 0.66
SLC6A4P31645 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A4P31645 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
SLC6A4P31645 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.2■□□□□ 0.66
SLC6A4P31645 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A4P31645 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.2■□□□□ 0.66
SLC6A4P31645 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SLC6A4P31645 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
SLC6A4P31645 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A4P31645 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC6A4P31645 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A4P31645 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC6A4P31645 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SLC6A4P31645 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A4P31645 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC6A4P31645 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A4P31645 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A4P31645 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A4P31645 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC6A4P31645 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.19■□□□□ 0.66
SLC6A4P31645 AC083849.1-201ENST00000615227 514 ntBASIC19.19■□□□□ 0.66
SLC6A4P31645 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A4P31645 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.19■□□□□ 0.66
SLC6A4P31645 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A4P31645 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A4P31645 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A4P31645 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A4P31645 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC6A4P31645 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A4P31645 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A4P31645 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SLC6A4P31645 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A4P31645 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A4P31645 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A4P31645 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms