Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
VARSP26640 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.39■□□□□ 0.54
VARSP26640 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.39■□□□□ 0.54
VARSP26640 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
VARSP26640 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VARSP26640 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.39■□□□□ 0.53
VARSP26640 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VARSP26640 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VARSP26640 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VARSP26640 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.39■□□□□ 0.53
VARSP26640 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VARSP26640 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VARSP26640 AC008040.2-201ENST00000461049 708 ntBASIC18.39■□□□□ 0.53
VARSP26640 AC091390.4-202ENST00000476426 537 ntBASIC18.39■□□□□ 0.53
VARSP26640 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VARSP26640 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.39■□□□□ 0.53
VARSP26640 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
VARSP26640 AP003071.4-201ENST00000562276 1284 ntBASIC18.39■□□□□ 0.53
VARSP26640 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
VARSP26640 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.39■□□□□ 0.53
VARSP26640 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.39■□□□□ 0.53
VARSP26640 AL031985.4-201ENST00000642138 673 ntBASIC18.39■□□□□ 0.53
VARSP26640 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VARSP26640 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VARSP26640 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VARSP26640 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
VARSP26640 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VARSP26640 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
VARSP26640 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VARSP26640 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VARSP26640 PCDHB18P-201ENST00000524813 2368 ntBASIC18.39■□□□□ 0.53
VARSP26640 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.39■□□□□ 0.53
VARSP26640 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VARSP26640 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARSP26640 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VARSP26640 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VARSP26640 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARSP26640 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARSP26640 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARSP26640 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARSP26640 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARSP26640 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.38■□□□□ 0.53
VARSP26640 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARSP26640 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
VARSP26640 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARSP26640 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.38■□□□□ 0.53
VARSP26640 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.38■□□□□ 0.53
VARSP26640 AL031598.1-201ENST00000561511 1773 ntBASIC18.38■□□□□ 0.53
VARSP26640 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.38■□□□□ 0.53
VARSP26640 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARSP26640 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VARSP26640 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VARSP26640 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARSP26640 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARSP26640 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.38■□□□□ 0.53
VARSP26640 AC011506.1-201ENST00000474329 610 ntBASIC18.38■□□□□ 0.53
VARSP26640 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.38■□□□□ 0.53
VARSP26640 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.38■□□□□ 0.53
VARSP26640 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VARSP26640 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.38■□□□□ 0.53
VARSP26640 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.38■□□□□ 0.53
VARSP26640 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.38■□□□□ 0.53
VARSP26640 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
VARSP26640 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARSP26640 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.38■□□□□ 0.53
VARSP26640 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
VARSP26640 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
VARSP26640 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
VARSP26640 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARSP26640 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARSP26640 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARSP26640 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VARSP26640 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VARSP26640 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VARSP26640 AC093525.10-201ENST00000625130 1569 ntBASIC18.38■□□□□ 0.53
VARSP26640 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARSP26640 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARSP26640 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VARSP26640 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VARSP26640 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VARSP26640 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VARSP26640 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VARSP26640 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VARSP26640 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VARSP26640 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VARSP26640 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VARSP26640 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.37■□□□□ 0.53
VARSP26640 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.37■□□□□ 0.53
VARSP26640 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
VARSP26640 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.37■□□□□ 0.53
VARSP26640 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.37■□□□□ 0.53
VARSP26640 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VARSP26640 AC011298.2-201ENST00000617989 482 ntBASIC18.37■□□□□ 0.53
VARSP26640 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.37■□□□□ 0.53
VARSP26640 KRT8P11-201ENST00000409686 1436 ntBASIC18.37■□□□□ 0.53
VARSP26640 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
VARSP26640 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VARSP26640 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VARSP26640 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VARSP26640 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms