Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.13■□□□□ 0.17
CCL1P22362 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCL1P22362 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.13■□□□□ 0.17
CCL1P22362 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL1P22362 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.13■□□□□ 0.17
CCL1P22362 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCL1P22362 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCL1P22362 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCL1P22362 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
CCL1P22362 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL1P22362 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL1P22362 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL1P22362 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL1P22362 MYLKP1-201ENST00000509077 1580 ntBASIC16.13■□□□□ 0.17
CCL1P22362 AC008556.1-201ENST00000610908 2040 ntBASIC16.12■□□□□ 0.17
CCL1P22362 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.12■□□□□ 0.17
CCL1P22362 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL1P22362 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.12■□□□□ 0.17
CCL1P22362 AL135905.2-201ENST00000584934 1404 ntBASIC16.12■□□□□ 0.17
CCL1P22362 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL1P22362 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL1P22362 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.12■□□□□ 0.17
CCL1P22362 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.12■□□□□ 0.17
CCL1P22362 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL1P22362 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL1P22362 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.12■□□□□ 0.17
CCL1P22362 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.12■□□□□ 0.17
CCL1P22362 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.12■□□□□ 0.17
CCL1P22362 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.12■□□□□ 0.17
CCL1P22362 DGCR10-201ENST00000609839 495 ntBASIC16.12■□□□□ 0.17
CCL1P22362 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCL1P22362 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL1P22362 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL1P22362 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCL1P22362 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL1P22362 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.12■□□□□ 0.17
CCL1P22362 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL1P22362 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.12■□□□□ 0.17
CCL1P22362 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL1P22362 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL1P22362 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCL1P22362 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CCL1P22362 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL1P22362 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.11■□□□□ 0.17
CCL1P22362 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL1P22362 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL1P22362 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL1P22362 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL1P22362 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.11■□□□□ 0.17
CCL1P22362 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.11■□□□□ 0.17
CCL1P22362 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CCL1P22362 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL1P22362 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL1P22362 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.11■□□□□ 0.17
CCL1P22362 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CCL1P22362 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.11■□□□□ 0.17
CCL1P22362 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL1P22362 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CCL1P22362 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.11■□□□□ 0.17
CCL1P22362 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.11■□□□□ 0.17
CCL1P22362 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.11■□□□□ 0.17
CCL1P22362 AC008622.2-201ENST00000617006 1229 ntBASIC16.11■□□□□ 0.17
CCL1P22362 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.11■□□□□ 0.17
CCL1P22362 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.11■□□□□ 0.17
CCL1P22362 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.11■□□□□ 0.17
CCL1P22362 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
CCL1P22362 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL1P22362 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL1P22362 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.11■□□□□ 0.17
CCL1P22362 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL1P22362 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL1P22362 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL1P22362 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL1P22362 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.11■□□□□ 0.17
CCL1P22362 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL1P22362 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL1P22362 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL1P22362 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCL1P22362 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.1■□□□□ 0.17
CCL1P22362 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.1■□□□□ 0.17
CCL1P22362 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL1P22362 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL1P22362 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL1P22362 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.1■□□□□ 0.17
CCL1P22362 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
CCL1P22362 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL1P22362 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCL1P22362 AP000593.1-201ENST00000393668 712 ntBASIC16.1■□□□□ 0.17
CCL1P22362 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.1■□□□□ 0.17
CCL1P22362 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCL1P22362 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.1■□□□□ 0.17
CCL1P22362 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
CCL1P22362 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.1■□□□□ 0.17
CCL1P22362 ITM2C-210ENST00000620962 501 ntBASIC16.1■□□□□ 0.17
CCL1P22362 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL1P22362 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCL1P22362 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CCL1P22362 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL1P22362 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CCL1P22362 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms