Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
NELFEP18615 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
NELFEP18615 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.47■□□□□ 0.55
NELFEP18615 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.47■□□□□ 0.55
NELFEP18615 ECEL1P2-202ENST00000465689 757 ntBASIC18.47■□□□□ 0.55
NELFEP18615 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
NELFEP18615 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.47■□□□□ 0.55
NELFEP18615 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.47■□□□□ 0.55
NELFEP18615 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
NELFEP18615 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
NELFEP18615 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NELFEP18615 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NELFEP18615 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.47■□□□□ 0.55
NELFEP18615 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NELFEP18615 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NELFEP18615 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NELFEP18615 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.47■□□□□ 0.55
NELFEP18615 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NELFEP18615 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NELFEP18615 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.46■□□□□ 0.55
NELFEP18615 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
NELFEP18615 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
NELFEP18615 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NELFEP18615 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NELFEP18615 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
NELFEP18615 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NELFEP18615 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NELFEP18615 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NELFEP18615 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.46■□□□□ 0.55
NELFEP18615 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.46■□□□□ 0.55
NELFEP18615 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NELFEP18615 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
NELFEP18615 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.46■□□□□ 0.55
NELFEP18615 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NELFEP18615 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.46■□□□□ 0.55
NELFEP18615 KRT18P57-201ENST00000443599 1254 ntBASIC18.46■□□□□ 0.55
NELFEP18615 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.46■□□□□ 0.55
NELFEP18615 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NELFEP18615 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.46■□□□□ 0.55
NELFEP18615 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.46■□□□□ 0.55
NELFEP18615 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.46■□□□□ 0.55
NELFEP18615 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
NELFEP18615 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.46■□□□□ 0.55
NELFEP18615 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NELFEP18615 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
NELFEP18615 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
NELFEP18615 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NELFEP18615 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NELFEP18615 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.46■□□□□ 0.55
NELFEP18615 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
NELFEP18615 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NELFEP18615 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NELFEP18615 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.46■□□□□ 0.55
NELFEP18615 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.46■□□□□ 0.55
NELFEP18615 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NELFEP18615 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NELFEP18615 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NELFEP18615 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NELFEP18615 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.46■□□□□ 0.54
NELFEP18615 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.46■□□□□ 0.54
NELFEP18615 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.46■□□□□ 0.54
NELFEP18615 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.45■□□□□ 0.54
NELFEP18615 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
NELFEP18615 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
NELFEP18615 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NELFEP18615 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NELFEP18615 KRT8P41-201ENST00000533985 1514 ntBASIC18.45■□□□□ 0.54
NELFEP18615 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
NELFEP18615 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NELFEP18615 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NELFEP18615 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NELFEP18615 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NELFEP18615 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NELFEP18615 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.45■□□□□ 0.54
NELFEP18615 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NELFEP18615 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.45■□□□□ 0.54
NELFEP18615 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.45■□□□□ 0.54
NELFEP18615 SLC25A1P2-201ENST00000430693 912 ntBASIC18.45■□□□□ 0.54
NELFEP18615 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
NELFEP18615 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.45■□□□□ 0.54
NELFEP18615 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.45■□□□□ 0.54
NELFEP18615 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.45■□□□□ 0.54
NELFEP18615 AC116562.4-202ENST00000641738 218 ntBASIC18.45■□□□□ 0.54
NELFEP18615 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NELFEP18615 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.45■□□□□ 0.54
NELFEP18615 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NELFEP18615 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NELFEP18615 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
NELFEP18615 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
NELFEP18615 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.45■□□□□ 0.54
NELFEP18615 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NELFEP18615 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NELFEP18615 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.45■□□□□ 0.54
NELFEP18615 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NELFEP18615 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NELFEP18615 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NELFEP18615 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
NELFEP18615 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
NELFEP18615 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NELFEP18615 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms