Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
VCLP18206 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VCLP18206 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VCLP18206 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
VCLP18206 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.82■□□□□ 0.6
VCLP18206 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
VCLP18206 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
VCLP18206 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VCLP18206 AL390961.4-201ENST00000623958 2535 ntBASIC18.81■□□□□ 0.6
VCLP18206 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
VCLP18206 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VCLP18206 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VCLP18206 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VCLP18206 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.81■□□□□ 0.6
VCLP18206 AL161938.1-201ENST00000569833 2180 ntBASIC18.81■□□□□ 0.6
VCLP18206 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
VCLP18206 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
VCLP18206 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
VCLP18206 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VCLP18206 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VCLP18206 AL390955.1-201ENST00000428694 934 ntBASIC18.81■□□□□ 0.6
VCLP18206 AC008040.2-201ENST00000461049 708 ntBASIC18.81■□□□□ 0.6
VCLP18206 LINC01023-201ENST00000606054 436 ntBASIC18.81■□□□□ 0.6
VCLP18206 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VCLP18206 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VCLP18206 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.81■□□□□ 0.6
VCLP18206 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VCLP18206 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.81■□□□□ 0.6
VCLP18206 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VCLP18206 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VCLP18206 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
VCLP18206 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.81■□□□□ 0.6
VCLP18206 AC104581.1-202ENST00000635932 2618 ntBASIC18.81■□□□□ 0.6
VCLP18206 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
VCLP18206 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VCLP18206 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VCLP18206 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.81■□□□□ 0.6
VCLP18206 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VCLP18206 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
VCLP18206 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VCLP18206 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VCLP18206 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VCLP18206 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VCLP18206 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VCLP18206 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
VCLP18206 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VCLP18206 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.8■□□□□ 0.6
VCLP18206 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VCLP18206 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
VCLP18206 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
VCLP18206 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
VCLP18206 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.8■□□□□ 0.6
VCLP18206 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.8■□□□□ 0.6
VCLP18206 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.8■□□□□ 0.6
VCLP18206 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.8■□□□□ 0.6
VCLP18206 AC133561.5-201ENST00000635547 218 ntBASIC18.8■□□□□ 0.6
VCLP18206 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
VCLP18206 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.8■□□□□ 0.6
VCLP18206 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VCLP18206 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
VCLP18206 AL133373.2-201ENST00000623187 2828 ntBASIC18.8■□□□□ 0.6
VCLP18206 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VCLP18206 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
VCLP18206 AP000997.3-201ENST00000623333 2250 ntBASIC18.8■□□□□ 0.6
VCLP18206 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VCLP18206 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VCLP18206 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.79■□□□□ 0.6
VCLP18206 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VCLP18206 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VCLP18206 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.79■□□□□ 0.6
VCLP18206 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.79■□□□□ 0.6
VCLP18206 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VCLP18206 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
VCLP18206 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VCLP18206 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VCLP18206 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VCLP18206 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.79■□□□□ 0.6
VCLP18206 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.79■□□□□ 0.6
VCLP18206 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.79■□□□□ 0.6
VCLP18206 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.79■□□□□ 0.6
VCLP18206 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.79■□□□□ 0.6
VCLP18206 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VCLP18206 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.79■□□□□ 0.6
VCLP18206 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VCLP18206 AC020763.4-201ENST00000623414 4170 ntBASIC18.79■□□□□ 0.6
VCLP18206 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VCLP18206 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VCLP18206 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VCLP18206 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
VCLP18206 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
VCLP18206 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VCLP18206 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VCLP18206 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VCLP18206 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.78■□□□□ 0.6
VCLP18206 BCL2-203ENST00000589955 5011 ntBASIC18.78■□□□□ 0.6
VCLP18206 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VCLP18206 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
VCLP18206 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VCLP18206 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
VCLP18206 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms