Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ERCC2P18074 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC2P18074 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC2P18074 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ERCC2P18074 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC2P18074 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC2P18074 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC2P18074 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ERCC2P18074 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.24■□□□□ 0.67
ERCC2P18074 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC2P18074 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC2P18074 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC2P18074 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.24■□□□□ 0.67
ERCC2P18074 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC2P18074 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.24■□□□□ 0.67
ERCC2P18074 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.24■□□□□ 0.67
ERCC2P18074 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC2P18074 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC2P18074 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.24■□□□□ 0.67
ERCC2P18074 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ERCC2P18074 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ERCC2P18074 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.24■□□□□ 0.67
ERCC2P18074 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.24■□□□□ 0.67
ERCC2P18074 RNF165-205ENST00000588679 2904 ntBASIC19.24■□□□□ 0.67
ERCC2P18074 AC036111.1-201ENST00000533973 1582 ntBASIC19.23■□□□□ 0.67
ERCC2P18074 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC2P18074 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC2P18074 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.23■□□□□ 0.67
ERCC2P18074 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ERCC2P18074 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC2P18074 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC2P18074 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC2P18074 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.23■□□□□ 0.67
ERCC2P18074 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
ERCC2P18074 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC2P18074 FAM87A-204ENST00000613235 858 ntBASIC19.23■□□□□ 0.67
ERCC2P18074 CR769767.2-201ENST00000622735 460 ntBASIC19.23■□□□□ 0.67
ERCC2P18074 AC073912.3-201ENST00000624414 853 ntBASIC19.23■□□□□ 0.67
ERCC2P18074 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
ERCC2P18074 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC2P18074 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC2P18074 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.23■□□□□ 0.67
ERCC2P18074 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ERCC2P18074 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC2P18074 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC2P18074 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ERCC2P18074 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.23■□□□□ 0.67
ERCC2P18074 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.23■□□□□ 0.67
ERCC2P18074 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC2P18074 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC2P18074 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC2P18074 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
ERCC2P18074 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ERCC2P18074 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC2P18074 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC2P18074 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.22■□□□□ 0.67
ERCC2P18074 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC2P18074 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC2P18074 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.22■□□□□ 0.67
ERCC2P18074 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC2P18074 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.22■□□□□ 0.67
ERCC2P18074 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC2P18074 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.22■□□□□ 0.67
ERCC2P18074 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.22■□□□□ 0.67
ERCC2P18074 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.22■□□□□ 0.67
ERCC2P18074 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.22■□□□□ 0.67
ERCC2P18074 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.22■□□□□ 0.67
ERCC2P18074 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ERCC2P18074 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC2P18074 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC2P18074 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.22■□□□□ 0.67
ERCC2P18074 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC2P18074 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.22■□□□□ 0.67
ERCC2P18074 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC2P18074 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ERCC2P18074 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC2P18074 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC2P18074 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC2P18074 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.21■□□□□ 0.67
ERCC2P18074 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
ERCC2P18074 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.21■□□□□ 0.67
ERCC2P18074 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC2P18074 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
ERCC2P18074 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC2P18074 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ERCC2P18074 KRT8P45-201ENST00000414328 1447 ntBASIC19.21■□□□□ 0.67
ERCC2P18074 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC2P18074 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.21■□□□□ 0.67
ERCC2P18074 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC2P18074 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ERCC2P18074 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.21■□□□□ 0.67
ERCC2P18074 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.21■□□□□ 0.67
ERCC2P18074 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC2P18074 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.21■□□□□ 0.67
ERCC2P18074 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.21■□□□□ 0.67
ERCC2P18074 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC2P18074 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
ERCC2P18074 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC2P18074 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.21■□□□□ 0.67
ERCC2P18074 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms