Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACANP16112 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ACANP16112 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
ACANP16112 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACANP16112 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ACANP16112 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ACANP16112 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACANP16112 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC15.29■□□□□ 0.04
ACANP16112 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACANP16112 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACANP16112 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ACANP16112 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACANP16112 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACANP16112 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACANP16112 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ACANP16112 AC092364.2-202ENST00000597012 1073 ntBASIC15.29■□□□□ 0.04
ACANP16112 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.29■□□□□ 0.04
ACANP16112 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.29■□□□□ 0.04
ACANP16112 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACANP16112 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.29■□□□□ 0.04
ACANP16112 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ACANP16112 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ACANP16112 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ACANP16112 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ACANP16112 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ACANP16112 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.28■□□□□ 0.04
ACANP16112 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.28■□□□□ 0.04
ACANP16112 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ACANP16112 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ACANP16112 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.28■□□□□ 0.04
ACANP16112 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.28■□□□□ 0.04
ACANP16112 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.28■□□□□ 0.04
ACANP16112 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.28■□□□□ 0.04
ACANP16112 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.28■□□□□ 0.04
ACANP16112 AP005117.1-201ENST00000584346 1413 ntBASIC15.28■□□□□ 0.04
ACANP16112 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC15.28■□□□□ 0.04
ACANP16112 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
ACANP16112 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ACANP16112 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.28■□□□□ 0.04
ACANP16112 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.28■□□□□ 0.04
ACANP16112 KRT18P28-201ENST00000453838 1332 ntBASIC15.28■□□□□ 0.04
ACANP16112 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
ACANP16112 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.28■□□□□ 0.04
ACANP16112 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.28■□□□□ 0.04
ACANP16112 AC002347.1-201ENST00000569543 541 ntBASIC15.28■□□□□ 0.04
ACANP16112 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ACANP16112 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.28■□□□□ 0.04
ACANP16112 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ACANP16112 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ACANP16112 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.28■□□□□ 0.04
ACANP16112 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ACANP16112 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ACANP16112 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.28■□□□□ 0.04
ACANP16112 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ACANP16112 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.27■□□□□ 0.04
ACANP16112 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.27■□□□□ 0.04
ACANP16112 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.27■□□□□ 0.04
ACANP16112 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.27■□□□□ 0.04
ACANP16112 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.27■□□□□ 0.04
ACANP16112 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.27■□□□□ 0.04
ACANP16112 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.27■□□□□ 0.04
ACANP16112 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
ACANP16112 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ACANP16112 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
ACANP16112 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ACANP16112 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ACANP16112 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
ACANP16112 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC15.27■□□□□ 0.03
ACANP16112 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ACANP16112 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
ACANP16112 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ACANP16112 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ACANP16112 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
ACANP16112 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.27■□□□□ 0.03
ACANP16112 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.27■□□□□ 0.03
ACANP16112 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
ACANP16112 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.27■□□□□ 0.03
ACANP16112 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
ACANP16112 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ACANP16112 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
ACANP16112 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ACANP16112 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.27■□□□□ 0.03
ACANP16112 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
ACANP16112 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ACANP16112 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.27■□□□□ 0.03
ACANP16112 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
ACANP16112 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.26■□□□□ 0.03
ACANP16112 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.26■□□□□ 0.03
ACANP16112 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.26■□□□□ 0.03
ACANP16112 CNN2P11-201ENST00000429351 262 ntBASIC15.26■□□□□ 0.03
ACANP16112 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.26■□□□□ 0.03
ACANP16112 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.26■□□□□ 0.03
ACANP16112 MTDHP3-201ENST00000594186 672 ntBASIC15.26■□□□□ 0.03
ACANP16112 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ACANP16112 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.26■□□□□ 0.03
ACANP16112 AC008735.5-201ENST00000623544 497 ntBASIC15.26■□□□□ 0.03
ACANP16112 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ACANP16112 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.26■□□□□ 0.03
ACANP16112 AC009237.14-201ENST00000609975 1594 ntBASIC15.26■□□□□ 0.03
ACANP16112 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms