Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.16■□□□□ 0.34
BMP4P12644 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BMP4P12644 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
BMP4P12644 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
BMP4P12644 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.16■□□□□ 0.34
BMP4P12644 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BMP4P12644 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
BMP4P12644 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BMP4P12644 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
BMP4P12644 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
BMP4P12644 AC133681.1-201ENST00000465482 601 ntBASIC17.16■□□□□ 0.34
BMP4P12644 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BMP4P12644 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.16■□□□□ 0.34
BMP4P12644 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.16■□□□□ 0.34
BMP4P12644 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
BMP4P12644 AC110285.5-201ENST00000611501 352 ntBASIC17.16■□□□□ 0.34
BMP4P12644 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.16■□□□□ 0.34
BMP4P12644 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
BMP4P12644 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BMP4P12644 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
BMP4P12644 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
BMP4P12644 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
BMP4P12644 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BMP4P12644 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.16■□□□□ 0.34
BMP4P12644 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BMP4P12644 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.16■□□□□ 0.34
BMP4P12644 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
BMP4P12644 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
BMP4P12644 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BMP4P12644 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BMP4P12644 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BMP4P12644 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BMP4P12644 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BMP4P12644 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BMP4P12644 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.16■□□□□ 0.34
BMP4P12644 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
BMP4P12644 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BMP4P12644 AC141586.5-201ENST00000624546 2050 ntBASIC17.16■□□□□ 0.34
BMP4P12644 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BMP4P12644 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
BMP4P12644 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
BMP4P12644 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BMP4P12644 AL139384.1-201ENST00000612143 3047 ntBASIC17.15■□□□□ 0.34
BMP4P12644 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.15■□□□□ 0.34
BMP4P12644 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BMP4P12644 LINC00896-202ENST00000609602 2128 ntBASIC17.15■□□□□ 0.34
BMP4P12644 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BMP4P12644 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BMP4P12644 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
BMP4P12644 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.15■□□□□ 0.34
BMP4P12644 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BMP4P12644 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.15■□□□□ 0.34
BMP4P12644 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BMP4P12644 AC084018.2-201ENST00000613093 2607 ntBASIC17.15■□□□□ 0.34
BMP4P12644 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.15■□□□□ 0.34
BMP4P12644 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BMP4P12644 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BMP4P12644 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
BMP4P12644 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BMP4P12644 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BMP4P12644 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.15■□□□□ 0.34
BMP4P12644 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BMP4P12644 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
BMP4P12644 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.15■□□□□ 0.34
BMP4P12644 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.15■□□□□ 0.34
BMP4P12644 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.15■□□□□ 0.34
BMP4P12644 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
BMP4P12644 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.15■□□□□ 0.34
BMP4P12644 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.15■□□□□ 0.34
BMP4P12644 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
BMP4P12644 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.15■□□□□ 0.34
BMP4P12644 AL023875.1-201ENST00000640777 796 ntBASIC17.15■□□□□ 0.34
BMP4P12644 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BMP4P12644 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
BMP4P12644 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
BMP4P12644 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.15■□□□□ 0.34
BMP4P12644 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
BMP4P12644 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BMP4P12644 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BMP4P12644 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
BMP4P12644 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BMP4P12644 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BMP4P12644 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.15■□□□□ 0.34
BMP4P12644 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BMP4P12644 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
BMP4P12644 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
BMP4P12644 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.14■□□□□ 0.33
BMP4P12644 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BMP4P12644 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.14■□□□□ 0.33
BMP4P12644 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
BMP4P12644 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BMP4P12644 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BMP4P12644 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BMP4P12644 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BMP4P12644 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
BMP4P12644 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
BMP4P12644 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BMP4P12644 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BMP4P12644 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
BMP4P12644 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms