Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CD48P09326 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD48P09326 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD48P09326 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD48P09326 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD48P09326 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.42■□□□□ 0.7
CD48P09326 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD48P09326 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CD48P09326 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD48P09326 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD48P09326 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CD48P09326 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD48P09326 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.41■□□□□ 0.7
CD48P09326 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CD48P09326 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD48P09326 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CD48P09326 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD48P09326 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.41■□□□□ 0.7
CD48P09326 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.41■□□□□ 0.7
CD48P09326 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.41■□□□□ 0.7
CD48P09326 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CD48P09326 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.41■□□□□ 0.7
CD48P09326 AP000525.1-201ENST00000608286 694 ntBASIC19.41■□□□□ 0.7
CD48P09326 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.41■□□□□ 0.7
CD48P09326 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD48P09326 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD48P09326 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.41■□□□□ 0.7
CD48P09326 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD48P09326 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.41■□□□□ 0.7
CD48P09326 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CD48P09326 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD48P09326 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.41■□□□□ 0.7
CD48P09326 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD48P09326 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.4■□□□□ 0.7
CD48P09326 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD48P09326 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.4■□□□□ 0.7
CD48P09326 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD48P09326 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD48P09326 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD48P09326 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.4■□□□□ 0.7
CD48P09326 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CD48P09326 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD48P09326 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CD48P09326 AL023284.2-201ENST00000405850 579 ntBASIC19.4■□□□□ 0.7
CD48P09326 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CD48P09326 AL390955.1-201ENST00000428694 934 ntBASIC19.4■□□□□ 0.7
CD48P09326 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.4■□□□□ 0.7
CD48P09326 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD48P09326 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.4■□□□□ 0.7
CD48P09326 TSPY15P-201ENST00000457163 923 ntBASIC19.4■□□□□ 0.7
CD48P09326 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD48P09326 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.4■□□□□ 0.7
CD48P09326 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CD48P09326 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD48P09326 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CD48P09326 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CD48P09326 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CD48P09326 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CD48P09326 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CD48P09326 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CD48P09326 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
CD48P09326 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CD48P09326 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD48P09326 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
CD48P09326 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CD48P09326 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD48P09326 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD48P09326 AL355075.4-201ENST00000554988 638 ntBASIC19.39■□□□□ 0.69
CD48P09326 MIR4674-201ENST00000582457 87 ntBASIC19.39■□□□□ 0.69
CD48P09326 MIR4785-201ENST00000585005 73 ntBASIC19.39■□□□□ 0.69
CD48P09326 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.39■□□□□ 0.69
CD48P09326 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CD48P09326 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD48P09326 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.39■□□□□ 0.69
CD48P09326 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CD48P09326 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CD48P09326 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CD48P09326 AC073592.3-201ENST00000625118 1834 ntBASIC19.39■□□□□ 0.69
CD48P09326 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD48P09326 AC135050.7-201ENST00000624508 2218 ntBASIC19.39■□□□□ 0.69
CD48P09326 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CD48P09326 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CD48P09326 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD48P09326 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD48P09326 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD48P09326 UNC93B2-201ENST00000285383 730 ntBASIC19.38■□□□□ 0.69
CD48P09326 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD48P09326 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
CD48P09326 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CD48P09326 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD48P09326 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD48P09326 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.38■□□□□ 0.69
CD48P09326 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD48P09326 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD48P09326 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.38■□□□□ 0.69
CD48P09326 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CD48P09326 AP005242.2-201ENST00000580065 1175 ntBASIC19.38■□□□□ 0.69
CD48P09326 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.38■□□□□ 0.69
CD48P09326 AL109659.2-201ENST00000606809 1674 ntBASIC19.38■□□□□ 0.69
CD48P09326 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms