Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.43■□□□□ 0.54
CAPN1P07384 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN1P07384 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN1P07384 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.43■□□□□ 0.54
CAPN1P07384 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN1P07384 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN1P07384 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN1P07384 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.43■□□□□ 0.54
CAPN1P07384 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN1P07384 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN1P07384 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CAPN1P07384 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN1P07384 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN1P07384 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN1P07384 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN1P07384 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN1P07384 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CAPN1P07384 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN1P07384 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CAPN1P07384 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
CAPN1P07384 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.42■□□□□ 0.54
CAPN1P07384 TSPY23P-201ENST00000440136 739 ntBASIC18.42■□□□□ 0.54
CAPN1P07384 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.42■□□□□ 0.54
CAPN1P07384 AC011506.1-201ENST00000474329 610 ntBASIC18.42■□□□□ 0.54
CAPN1P07384 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN1P07384 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.42■□□□□ 0.54
CAPN1P07384 AC010947.1-201ENST00000623454 693 ntBASIC18.42■□□□□ 0.54
CAPN1P07384 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CAPN1P07384 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN1P07384 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.42■□□□□ 0.54
CAPN1P07384 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN1P07384 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN1P07384 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN1P07384 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN1P07384 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
CAPN1P07384 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN1P07384 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.42■□□□□ 0.54
CAPN1P07384 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN1P07384 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CAPN1P07384 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN1P07384 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN1P07384 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN1P07384 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN1P07384 FSCN1P1-201ENST00000568912 1481 ntBASIC18.41■□□□□ 0.54
CAPN1P07384 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.41■□□□□ 0.54
CAPN1P07384 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN1P07384 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN1P07384 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CAPN1P07384 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN1P07384 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN1P07384 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN1P07384 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.41■□□□□ 0.54
CAPN1P07384 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN1P07384 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CAPN1P07384 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN1P07384 B3GAT3P1-201ENST00000471720 806 ntBASIC18.41■□□□□ 0.54
CAPN1P07384 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.41■□□□□ 0.54
CAPN1P07384 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.41■□□□□ 0.54
CAPN1P07384 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.41■□□□□ 0.54
CAPN1P07384 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN1P07384 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN1P07384 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN1P07384 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN1P07384 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.41■□□□□ 0.54
CAPN1P07384 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN1P07384 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN1P07384 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN1P07384 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN1P07384 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.41■□□□□ 0.54
CAPN1P07384 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN1P07384 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CAPN1P07384 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN1P07384 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN1P07384 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.4■□□□□ 0.54
CAPN1P07384 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN1P07384 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.4■□□□□ 0.54
CAPN1P07384 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN1P07384 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN1P07384 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CAPN1P07384 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
CAPN1P07384 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CAPN1P07384 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CAPN1P07384 AC083906.6-201ENST00000641366 219 ntBASIC18.4■□□□□ 0.54
CAPN1P07384 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.4■□□□□ 0.54
CAPN1P07384 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN1P07384 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN1P07384 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN1P07384 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN1P07384 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN1P07384 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CAPN1P07384 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.39■□□□□ 0.54
CAPN1P07384 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CAPN1P07384 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CAPN1P07384 KRT8P41-201ENST00000533985 1514 ntBASIC18.39■□□□□ 0.54
CAPN1P07384 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN1P07384 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN1P07384 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
CAPN1P07384 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN1P07384 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CAPN1P07384 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms